Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PSMD10P2-201ENST00000432890 672 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AC003989.1-201ENST00000434569 565 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 EMC3-AS1-205ENST00000438698 534 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 CXCR2P1-202ENST00000443392 1074 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 RBMY3AP-201ENST00000449381 1145 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 Z83838.1-202ENST00000456225 839 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 RPL12P31-201ENST00000478433 450 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AP002884.1-201ENST00000479691 655 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AC022206.1-201ENST00000495947 347 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGA1P17096 AC002519.2-203ENST00000567043 837 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.74□□□□□ -1.33
HMGA1P17096 AL359704.2-201ENST00000604335 521 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 RPSAP75-201ENST00000605848 301 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGA1P17096 AL357140.4-201ENST00000636827 412 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 MROH3P-201ENST00000435735 2676 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 AC105114.1-201ENST00000624795 1862 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 AL023806.3-201ENST00000638502 2704 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 AC062022.1-201ENST00000451026 1684 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 AL713922.1-201ENST00000416477 747 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 RPL5P7-201ENST00000444235 813 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 RN7SL643P-201ENST00000471845 291 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 SNX18P25-201ENST00000510539 758 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGA1P17096 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGA1P17096 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 DYNLL1P1-201ENST00000595442 269 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 MRPL57P1-201ENST00000621486 265 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 AC073488.6-201ENST00000632293 754 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 AP003486.1-201ENST00000525716 3994 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.73□□□□□ -1.33
HMGA1P17096 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 XIST-206ENST00000434839 2865 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.73□□□□□ -1.33
HMGA1P17096 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGA1P17096 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGA1P17096 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
HMGA1P17096 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGA1P17096 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGA1P17096 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGA1P17096 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGA1P17096 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HMGA1P17096 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HMGA1P17096 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGA1P17096 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGA1P17096 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms