Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 RNA5SP321-201ENST00000362722 111 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AL359694.1-201ENST00000403247 604 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 RN7SKP38-201ENST00000410782 309 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 GAPDHP19-201ENST00000431768 1005 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 CDK7P1-201ENST00000434574 693 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 RBMY2HP-201ENST00000457961 720 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC016144.1-201ENST00000548175 1087 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AL445383.1-201ENST00000554689 874 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC073862.4-201ENST00000622982 854 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 AC068213.1-201ENST00000625124 226 ntBASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP2Q9UDT6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP2Q9UDT6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC105114.1-201ENST00000624795 1862 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 RN7SKP271-201ENST00000410528 320 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC239367.3-201ENST00000428996 814 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 RPS18P1-201ENST00000447840 458 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 RPL26P30-201ENST00000453533 435 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 RN7SL382P-201ENST00000482631 282 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC091133.5-201ENST00000603088 301 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 RAB28P4-201ENST00000622233 665 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 AL136531.3-201ENST00000624378 3658 ntBASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CLIP2Q9UDT6 CDY5P-201ENST00000411487 1580 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 CDY9P-201ENST00000451397 1580 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC122713.2-201ENST00000624942 3335 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC217777.1-201ENST00000570034 1471 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 FO082842.1-201ENST00000423552 1370 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 RNU1-55P-201ENST00000365510 158 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AL133260.1-201ENST00000405720 405 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 RPL7AP51-201ENST00000422016 760 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 GAPDHP37-201ENST00000442317 968 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AP001000.1-201ENST00000526843 742 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 OR9L1P-201ENST00000529493 933 ntBASIC7.88□□□□□ -1.15
CLIP2Q9UDT6 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms