Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 AC093458.1-201ENST00000608912 222 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 FRG2MP-201ENST00000613317 856 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 Y_RNA.804-201ENST00000615262 101 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 AC010133.1-201ENST00000615809 842 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 RN7SL820P-201ENST00000616437 299 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 AL354685.2-201ENST00000448218 1447 ntBASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
FOXR1Q6PIV2 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RN7SKP77-201ENST00000363261 353 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RN7SKP133-201ENST00000364845 340 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 SNORA26.8-201ENST00000391306 124 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RNA5SP221-201ENST00000411271 103 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AL109913.1-201ENST00000421173 514 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RPL7P53-201ENST00000421245 739 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ARL6IP1P2-201ENST00000431356 563 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 MORF4L1P5-201ENST00000433352 961 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 MTND3P21-201ENST00000433774 331 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 NDUFS5P5-201ENST00000437256 321 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC087499.3-202ENST00000441215 1173 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 MTND1P30-201ENST00000441241 901 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CASP3P1-201ENST00000446037 609 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 OTX2P1-201ENST00000450956 354 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RNU6-956P-201ENST00000458868 103 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AP002371.1-201ENST00000463604 433 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 RN7SL757P-201ENST00000466709 301 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC00888-204ENST00000487386 421 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 GAPDHP31-201ENST00000509325 1014 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 HIGD1AP10-201ENST00000527837 282 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 SNX29P2-204ENST00000603801 875 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC018618.2-201ENST00000604770 446 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 AC099654.5-201ENST00000636479 350 ntBASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.25□□□□□ -1.09
FOXR1Q6PIV2 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms