Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 HSPD1P9-201ENST00000420325 1636 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 CLCA3P-203ENST00000490028 2781 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 U3.25-201ENST00000391209 220 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 MIR1203-201ENST00000408812 85 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RN7SKP286-201ENST00000410894 299 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 BMS1P13-201ENST00000417301 885 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RPL12P16-201ENST00000431098 498 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC016908.1-201ENST00000442571 1219 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 BMS1P10-201ENST00000443754 1120 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RPL31P15-201ENST00000449770 338 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 CFL1P4-201ENST00000451536 498 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC022206.1-201ENST00000495947 347 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RPA2P1-201ENST00000556557 721 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC010547.6-201ENST00000571789 193 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AC233702.7-202ENST00000582941 211 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 AL136228.1-201ENST00000622221 319 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 RBMY1HP-201ENST00000382759 1389 ntBASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CDC42BPAQ5VT25 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC005332.9-201ENST00000620266 2921 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 ZSWIM5P3-201ENST00000511265 2743 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 SNORA21-201ENST00000362423 132 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 RNA5SP438-201ENST00000516561 112 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC022826.1-201ENST00000519383 805 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC009120.3-201ENST00000563335 499 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 STARD6-202ENST00000577499 696 ntTSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AL512624.1-201ENST00000613638 469 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 AC126175.1-201ENST00000617041 758 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC9.61□□□□□ -0.87
CDC42BPAQ5VT25 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 SPATA31B1P-201ENST00000434692 4016 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AL355355.1-201ENST00000442900 793 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AL512593.1-201ENST00000444758 779 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC023141.9-201ENST00000458734 412 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC021074.2-201ENST00000468434 172 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC129778.1-202ENST00000623812 261 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AL591379.1-207ENST00000635982 261 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AMYH02020865.1-205ENST00000636189 261 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 AC104964.2-201ENST00000562242 4641 ntBASIC9.6□□□□□ -0.87
CDC42BPAQ5VT25 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms