Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.27□□□□□ -1.25
VCPP55072 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 AC087575.1-201ENST00000585087 229 ntBASIC7.27□□□□□ -1.25
VCPP55072 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.27□□□□□ -1.25
VCPP55072 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 AP002345.2-201ENST00000609961 904 ntBASIC7.27□□□□□ -1.25
VCPP55072 MIR6721-201ENST00000617181 87 ntBASIC7.27□□□□□ -1.25
VCPP55072 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.27□□□□□ -1.25
VCPP55072 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VCPP55072 CDY19P-201ENST00000411668 1613 ntBASIC7.27□□□□□ -1.25
VCPP55072 CDY18P-201ENST00000438294 1609 ntBASIC7.27□□□□□ -1.25
VCPP55072 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.27□□□□□ -1.25
VCPP55072 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
VCPP55072 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.26□□□□□ -1.25
VCPP55072 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VCPP55072 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.26□□□□□ -1.25
VCPP55072 RN7SKP271-201ENST00000410528 320 ntBASIC7.26□□□□□ -1.25
VCPP55072 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 ARMC4P1-201ENST00000438905 707 ntBASIC7.26□□□□□ -1.25
VCPP55072 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.26□□□□□ -1.25
VCPP55072 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.26□□□□□ -1.25
VCPP55072 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.26□□□□□ -1.25
VCPP55072 SCARNA6-201ENST00000515982 265 ntBASIC7.26□□□□□ -1.25
VCPP55072 AC079866.1-201ENST00000534985 1220 ntBASIC7.26□□□□□ -1.25
VCPP55072 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.26□□□□□ -1.25
VCPP55072 MRPS21P9-201ENST00000571150 257 ntBASIC7.26□□□□□ -1.25
VCPP55072 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 SNORA70D-201ENST00000578836 135 ntBASIC7.26□□□□□ -1.25
VCPP55072 GTF2IP6-201ENST00000583143 541 ntBASIC7.26□□□□□ -1.25
VCPP55072 AC011447.2-201ENST00000592921 283 ntBASIC7.26□□□□□ -1.25
VCPP55072 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.26□□□□□ -1.25
VCPP55072 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.26□□□□□ -1.25
VCPP55072 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
VCPP55072 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.26□□□□□ -1.25
VCPP55072 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VCPP55072 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.25□□□□□ -1.25
VCPP55072 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.25□□□□□ -1.25
VCPP55072 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 SNORA51.1-201ENST00000363243 140 ntBASIC7.25□□□□□ -1.25
VCPP55072 RN7SKP237-201ENST00000364663 301 ntBASIC7.25□□□□□ -1.25
VCPP55072 RN7SKP189-201ENST00000365042 330 ntBASIC7.25□□□□□ -1.25
VCPP55072 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.25□□□□□ -1.25
VCPP55072 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
VCPP55072 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VCPP55072 AC018804.1-201ENST00000430381 618 ntBASIC7.25□□□□□ -1.25
VCPP55072 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.25□□□□□ -1.25
VCPP55072 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.25□□□□□ -1.25
VCPP55072 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms