Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CIITAP33076 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 RPL5P20-201ENST00000403848 896 ntBASIC7.47□□□□□ -1.21
CIITAP33076 RN7SKP188-201ENST00000410789 317 ntBASIC7.47□□□□□ -1.21
CIITAP33076 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.47□□□□□ -1.21
CIITAP33076 RPS20P25-201ENST00000412447 352 ntBASIC7.47□□□□□ -1.21
CIITAP33076 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.47□□□□□ -1.21
CIITAP33076 AC009500.1-201ENST00000420684 583 ntBASIC7.47□□□□□ -1.21
CIITAP33076 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.47□□□□□ -1.21
CIITAP33076 CYCSP52-201ENST00000422857 310 ntBASIC7.47□□□□□ -1.21
CIITAP33076 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.47□□□□□ -1.21
CIITAP33076 OR6R1P-201ENST00000431838 940 ntBASIC7.47□□□□□ -1.21
CIITAP33076 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.47□□□□□ -1.21
CIITAP33076 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.47□□□□□ -1.21
CIITAP33076 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.47□□□□□ -1.21
CIITAP33076 KF459542.1-201ENST00000450908 553 ntBASIC7.47□□□□□ -1.21
CIITAP33076 AL139156.3-201ENST00000454802 394 ntBASIC7.47□□□□□ -1.21
CIITAP33076 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.47□□□□□ -1.21
CIITAP33076 AC063943.2-201ENST00000495697 534 ntBASIC7.47□□□□□ -1.21
CIITAP33076 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 AC138517.1-201ENST00000515724 568 ntBASIC7.47□□□□□ -1.21
CIITAP33076 IGHV3-57-201ENST00000520143 280 ntBASIC7.47□□□□□ -1.21
CIITAP33076 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 AC008429.2-201ENST00000523057 864 ntBASIC7.47□□□□□ -1.21
CIITAP33076 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.47□□□□□ -1.21
CIITAP33076 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.47□□□□□ -1.21
CIITAP33076 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.47□□□□□ -1.21
CIITAP33076 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.47□□□□□ -1.21
CIITAP33076 AC092718.4-201ENST00000566639 716 ntBASIC7.47□□□□□ -1.21
CIITAP33076 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.47□□□□□ -1.21
CIITAP33076 MIR212-201ENST00000586026 110 ntBASIC7.47□□□□□ -1.21
CIITAP33076 AL359704.2-201ENST00000604335 521 ntBASIC7.47□□□□□ -1.21
CIITAP33076 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.47□□□□□ -1.21
CIITAP33076 AC012653.2-201ENST00000621880 420 ntBASIC7.47□□□□□ -1.21
CIITAP33076 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CIITAP33076 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.47□□□□□ -1.21
CIITAP33076 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CIITAP33076 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
CIITAP33076 AC092725.2-201ENST00000567658 1389 ntBASIC7.46□□□□□ -1.21
CIITAP33076 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
CIITAP33076 AC061975.7-201ENST00000592016 2692 ntBASIC7.46□□□□□ -1.21
CIITAP33076 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CIITAP33076 AP001157.1-201ENST00000550837 2339 ntBASIC7.46□□□□□ -1.21
CIITAP33076 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.46□□□□□ -1.21
CIITAP33076 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CIITAP33076 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 OR2M1P-201ENST00000318104 951 ntBASIC7.46□□□□□ -1.22
CIITAP33076 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CIITAP33076 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.46□□□□□ -1.22
CIITAP33076 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AC004890.1-201ENST00000461005 181 ntBASIC7.46□□□□□ -1.22
CIITAP33076 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CIITAP33076 RPL5P14-201ENST00000494197 878 ntBASIC7.46□□□□□ -1.22
CIITAP33076 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.46□□□□□ -1.22
CIITAP33076 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.46□□□□□ -1.22
CIITAP33076 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.46□□□□□ -1.22
CIITAP33076 MIR4732-201ENST00000581873 76 ntBASIC7.46□□□□□ -1.22
CIITAP33076 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.46□□□□□ -1.22
CIITAP33076 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AC004805.3-201ENST00000603178 310 ntBASIC7.46□□□□□ -1.22
CIITAP33076 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 AC025171.4-201ENST00000607250 1047 ntBASIC7.46□□□□□ -1.22
CIITAP33076 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.46□□□□□ -1.22
CIITAP33076 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.46□□□□□ -1.22
CIITAP33076 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CIITAP33076 MROH3P-201ENST00000435735 2676 ntBASIC7.46□□□□□ -1.22
CIITAP33076 AC022819.1-201ENST00000563495 3910 ntBASIC7.46□□□□□ -1.22
CIITAP33076 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.46□□□□□ -1.22
CIITAP33076 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.46□□□□□ -1.22
CIITAP33076 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CIITAP33076 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.45□□□□□ -1.22
CIITAP33076 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms