Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC009997.1-201ENST00000557862 129 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC034105.2-201ENST00000561866 238 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC136944.5-201ENST00000573021 151 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 SNX6P1-201ENST00000601728 1224 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AL138960.1-201ENST00000613838 513 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC012653.2-201ENST00000621880 420 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 AP001284.1-201ENST00000528393 2118 ntBASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P1B2RPK0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RNA5SP203-201ENST00000410451 136 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 FTOP1-201ENST00000419363 861 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RN7SL392P-201ENST00000473024 299 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 LARP7P4-201ENST00000481075 878 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RN7SL382P-201ENST00000482631 282 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 IGHV3-57-201ENST00000520143 280 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AL355076.3-201ENST00000555838 587 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC063923.2-201ENST00000562158 928 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RN7SL376P-201ENST00000578594 264 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AF146191.1-201ENST00000604941 889 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC025287.2-201ENST00000621911 668 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AL136298.2-201ENST00000556497 1570 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 AC119674.1-213ENST00000641177 1386 ntBASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P1B2RPK0 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 RN7SKP237-201ENST00000364663 301 ntBASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 MIR654-201ENST00000385199 81 ntBASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGB1P1B2RPK0 CXADRP1-201ENST00000398098 1095 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms