Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SNORA38B-201ENST00000363524 131 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 MIR1286-201ENST00000408112 78 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 RPS7P12-201ENST00000422385 582 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 UBA52P7-201ENST00000486088 380 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC027026.1-201ENST00000532323 742 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ZNF322P1-201ENST00000568013 1209 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CTSLP2-201ENST00000580501 394 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 NEPNP-201ENST00000404786 1371 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 USP3-201ENST00000268049 5311 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 MRRFP1-201ENST00000435941 1675 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 RN7SKP59-201ENST00000410520 314 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL022100.1-202ENST00000421214 548 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC092647.3-201ENST00000443044 633 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC004815.1-201ENST00000484185 331 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC092681.3-201ENST00000609463 678 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC010886.1-201ENST00000437380 2869 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 ANKRD20A11P-206ENST00000451663 3717 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 LSM3P3-201ENST00000436601 306 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL161722.1-201ENST00000446972 1032 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 RN7SL184P-201ENST00000488308 297 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC009704.2-201ENST00000618739 483 ntBASIC6.12□□□□□ -1.43
CHD8Q9HCK8 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.12□□□□□ -1.43
CHD8Q9HCK8 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 PPIAP22-201ENST00000358455 498 ntBASIC6.11□□□□□ -1.43
CHD8Q9HCK8 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 AL445238.1-204ENST00000400311 463 ntBASIC6.11□□□□□ -1.43
CHD8Q9HCK8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.11□□□□□ -1.43
CHD8Q9HCK8 AL035660.1-201ENST00000422041 222 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms