Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 PSMC1P4-201ENST00000515236 1327 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC018765.1-201ENST00000623357 3446 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 PPIAP24-201ENST00000328558 471 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RN7SKP191-201ENST00000364713 306 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC000089.1-201ENST00000424559 801 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 GAPDHP20-201ENST00000444107 1007 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 TREML3P-201ENST00000457327 501 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RN7SL492P-201ENST00000460700 295 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RPL9P15-201ENST00000491096 532 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RN7SL612P-201ENST00000497704 295 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 IGKV2D-38-201ENST00000518423 240 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 BCAS2P1-201ENST00000528022 632 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC126323.4-201ENST00000566935 234 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 RPL29P33-201ENST00000587474 316 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC024085.1-201ENST00000604299 432 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC091193.1-201ENST00000604640 448 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC025171.4-201ENST00000607250 1047 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC024255.1-201ENST00000614376 102 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC007671.1-201ENST00000616957 830 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC087269.2-201ENST00000641764 975 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC034229.2-201ENST00000566945 2508 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 WBP11P1-201ENST00000562560 1931 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 AC006213.6-201ENST00000623722 4179 ntBASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL359092.1-201ENST00000417156 265 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 Z68868.1-201ENST00000429048 544 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AC013403.1-201ENST00000436954 263 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL390198.2-201ENST00000510553 222 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 RN7SL475P-201ENST00000583379 298 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL078623.1-201ENST00000602702 907 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 MRPL57P1-201ENST00000621486 265 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AL035425.4-201ENST00000624509 1063 ntBASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RSPO3Q9BXY4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms