Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC100756.3-201ENST00000618455 1816 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 EIF4BP2-201ENST00000416702 1794 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 OR7E122P-202ENST00000641144 6171 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 Y_RNA.295-201ENST00000364918 102 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 SNORA73A-201ENST00000364938 206 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 U3.18-201ENST00000390880 216 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 DNAJC19P6-201ENST00000401853 280 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 RN7SKP139-201ENST00000410411 293 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC005189.1-201ENST00000431286 310 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 MTND4LP10-201ENST00000435146 291 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 TMX2P1-201ENST00000436507 708 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 OSTCP2-201ENST00000437956 444 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 PA2G4P6-201ENST00000438325 1197 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC239367.1-201ENST00000439389 936 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 PCNPP2-201ENST00000441651 455 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 OR7E102P-201ENST00000448855 1015 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 PSPHP1-201ENST00000450062 261 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 UBTFL6-201ENST00000477929 1024 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 OR9A3P-202ENST00000485185 878 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 RPS3P7-201ENST00000488662 726 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 WBP1LP4-201ENST00000505043 344 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 IGKV2D-14-201ENST00000522473 355 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 IGKV2OR22-4-201ENST00000523309 367 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC078886.1-201ENST00000549144 554 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 SNRPCP20-201ENST00000588011 210 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AF146191.1-201ENST00000604941 889 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AL021368.3-201ENST00000607119 578 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC008536.2-201ENST00000607284 349 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC091953.4-201ENST00000625179 341 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 EXOC7P1-201ENST00000509881 2059 ntBASIC8.82□□□□□ -1
SCUBE3Q8IX30 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCUBE3Q8IX30 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CDY4P-201ENST00000418290 1513 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 PSG10P-201ENST00000501199 1500 ntBASIC8.81□□□□□ -1
SCUBE3Q8IX30 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SCUBE3Q8IX30 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.81□□□□□ -1
SCUBE3Q8IX30 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms