Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC117409.1-201ENST00000470499 1310 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SPRYD7P1-201ENST00000443861 570 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 RPS23P1-201ENST00000491662 432 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 IGLV3-4-201ENST00000432300 244 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS13CQ709C8 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS13CQ709C8 AC105114.1-201ENST00000624795 1862 ntBASIC5.11□□□□□ -1.59
VPS13CQ709C8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 ANKRD54P1-201ENST00000433115 471 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC245452.2-201ENST00000435222 392 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 RPL12P3-201ENST00000440080 396 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC009120.1-201ENST00000493458 473 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC092121.1-201ENST00000569452 202 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL359704.2-201ENST00000604335 521 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC118658.2-201ENST00000618697 459 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 GUCY1B2-204ENST00000531898 1979 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AP003486.1-201ENST00000525716 3994 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 RNU1-134P-201ENST00000362935 165 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL355375.1-201ENST00000405686 392 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 RN7SL714P-201ENST00000487050 298 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 WBP1LP3-201ENST00000523033 208 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AC010998.3-201ENST00000613871 631 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL445649.1-201ENST00000615941 691 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 CCDC144CP-202ENST00000433419 5227 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13CQ709C8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 RPL5P5-201ENST00000392009 893 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13CQ709C8 RPL5P9-201ENST00000448118 886 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 ACA64.1-201ENST00000459171 127 ntBASIC5.1□□□□□ -1.59
VPS13CQ709C8 AL355032.1-201ENST00000472981 438 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms