Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 CASC19-228ENST00000641414 1684 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 FADS2P1-201ENST00000611807 1446 ntBASIC6.58□□□□□ -1.36
ZNF549Q6P9A3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 HCFC2P1-201ENST00000392864 1592 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC126474.2-201ENST00000623268 1750 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP333-201ENST00000363466 118 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP334-201ENST00000364825 118 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AL121578.2-201ENST00000448797 447 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC114940.1-201ENST00000512162 1265 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC093878.1-201ENST00000515630 432 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 SNORA48.9-201ENST00000516419 162 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 IGLV3-6-201ENST00000523937 250 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC130366.1-201ENST00000526505 1192 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC103855.4-201ENST00000533158 265 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AP003115.1-201ENST00000569849 463 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 MIR4312-201ENST00000579909 76 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AL683813.2-201ENST00000605245 502 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC005277.2-201ENST00000617898 390 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC027559.1-201ENST00000636288 271 ntBASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ZNF549Q6P9A3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 API5P1-201ENST00000424316 1510 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 NEK2P2-201ENST00000438441 1338 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 SMC4P1-201ENST00000414479 527 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 RBM22P7-201ENST00000421321 280 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 SDR42E1P3-201ENST00000438345 502 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL512637.1-201ENST00000439523 1231 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL356133.1-201ENST00000444762 372 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 RPL36AP55-201ENST00000454114 305 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC236972.4-201ENST00000458091 963 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP318-201ENST00000516352 92 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms