Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 ATP5BP1-201ENST00000411980 1574 ntBASIC7.17□□□□□ -1.26
SSR1P43307 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 RNA5SP114-201ENST00000363780 113 ntBASIC7.17□□□□□ -1.26
SSR1P43307 CYCSP17-201ENST00000407870 315 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 AC009518.3-201ENST00000438972 253 ntBASIC7.17□□□□□ -1.26
SSR1P43307 PMS2P9-201ENST00000441237 515 ntBASIC7.17□□□□□ -1.26
SSR1P43307 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.17□□□□□ -1.26
SSR1P43307 AC083806.1-201ENST00000468934 316 ntBASIC7.17□□□□□ -1.26
SSR1P43307 RN7SL456P-201ENST00000469290 295 ntBASIC7.17□□□□□ -1.26
SSR1P43307 RN7SL187P-201ENST00000495587 303 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AL135933.1-201ENST00000498657 802 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 IGLC4-201ENST00000517690 248 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.17□□□□□ -1.26
SSR1P43307 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.17□□□□□ -1.26
SSR1P43307 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
SSR1P43307 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.17□□□□□ -1.26
SSR1P43307 MIR5095-201ENST00000578844 88 ntBASIC7.17□□□□□ -1.26
SSR1P43307 RN7SL42P-201ENST00000579786 294 ntBASIC7.17□□□□□ -1.26
SSR1P43307 CTSLP2-201ENST00000580501 394 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AL049829.3-202ENST00000604278 711 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AC004908.1-201ENST00000606572 541 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AC091768.1-201ENST00000609258 930 ntBASIC7.17□□□□□ -1.26
SSR1P43307 AC008626.2-201ENST00000624425 248 ntBASIC7.17□□□□□ -1.26
SSR1P43307 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 GOT2P1-201ENST00000440922 1309 ntBASIC7.17□□□□□ -1.26
SSR1P43307 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.17□□□□□ -1.26
SSR1P43307 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SSR1P43307 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SSR1P43307 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 AC015689.2-201ENST00000528172 1738 ntBASIC7.16□□□□□ -1.26
SSR1P43307 AC105114.1-201ENST00000624795 1862 ntBASIC7.16□□□□□ -1.26
SSR1P43307 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SSR1P43307 MIR301B-201ENST00000390813 78 ntBASIC7.16□□□□□ -1.26
SSR1P43307 RN7SKP268-201ENST00000411107 316 ntBASIC7.16□□□□□ -1.26
SSR1P43307 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 SNRPEP5-201ENST00000425442 278 ntBASIC7.16□□□□□ -1.26
SSR1P43307 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.16□□□□□ -1.26
SSR1P43307 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.16□□□□□ -1.26
SSR1P43307 PHB2P1-201ENST00000434943 890 ntBASIC7.16□□□□□ -1.26
SSR1P43307 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 RN7SL216P-201ENST00000471607 298 ntBASIC7.16□□□□□ -1.26
SSR1P43307 RPL5P15-201ENST00000475870 897 ntBASIC7.16□□□□□ -1.26
SSR1P43307 DCAF13P2-201ENST00000514188 555 ntBASIC7.16□□□□□ -1.26
SSR1P43307 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.16□□□□□ -1.26
SSR1P43307 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 SSU72P6-201ENST00000532644 488 ntBASIC7.16□□□□□ -1.26
SSR1P43307 FXNP1-201ENST00000555153 337 ntBASIC7.16□□□□□ -1.26
SSR1P43307 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.16□□□□□ -1.26
SSR1P43307 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 MIR6731-201ENST00000614863 72 ntBASIC7.16□□□□□ -1.26
SSR1P43307 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.16□□□□□ -1.26
SSR1P43307 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSR1P43307 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.16□□□□□ -1.26
SSR1P43307 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 MAPK10-344ENST00000641718 3746 ntBASIC7.15□□□□□ -1.26
SSR1P43307 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSR1P43307 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.15□□□□□ -1.26
SSR1P43307 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms