Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 SCARNA18.1-201ENST00000516330 83 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.67□□□□□ -1.18
COL4A5P29400 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 BNIP3P32-201ENST00000600015 554 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 RPL12P48-201ENST00000605620 304 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 AL352984.2-201ENST00000611153 546 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC015871.3-201ENST00000618835 2261 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
COL4A5P29400 AC005077.1-201ENST00000449226 375 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 AP006222.1-205ENST00000450734 457 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 SBDSP1-204ENST00000453858 737 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.67□□□□□ -1.18
COL4A5P29400 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.67□□□□□ -1.18
COL4A5P29400 AC010327.2-201ENST00000587647 488 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.67□□□□□ -1.18
COL4A5P29400 RN7SL787P-201ENST00000613000 284 ntBASIC7.67□□□□□ -1.18
COL4A5P29400 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7.66□□□□□ -1.18
COL4A5P29400 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.66□□□□□ -1.18
COL4A5P29400 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
COL4A5P29400 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.66□□□□□ -1.18
COL4A5P29400 AC087501.5-201ENST00000607496 2374 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
COL4A5P29400 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 RNA5SP500-201ENST00000364486 119 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 BX284632.2-201ENST00000421091 399 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.66□□□□□ -1.18
COL4A5P29400 GAPDHP75-201ENST00000433910 943 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 AL512605.1-202ENST00000441919 381 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 AL359955.2-201ENST00000445380 353 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 RN7SL326P-201ENST00000477493 296 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.66□□□□□ -1.18
COL4A5P29400 OR9L1P-201ENST00000529493 933 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.66□□□□□ -1.18
COL4A5P29400 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL4A5P29400 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.66□□□□□ -1.18
COL4A5P29400 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC7.66□□□□□ -1.18
COL4A5P29400 AC125238.2-201ENST00000430003 1440 ntBASIC7.66□□□□□ -1.18
COL4A5P29400 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL4A5P29400 AC011447.6-201ENST00000623510 2598 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
COL4A5P29400 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
COL4A5P29400 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.65□□□□□ -1.18
COL4A5P29400 RBMY1HP-201ENST00000382759 1389 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
COL4A5P29400 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.65□□□□□ -1.18
COL4A5P29400 IGLV3-4-201ENST00000432300 244 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 AC064862.4-201ENST00000442180 334 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 AC022206.1-201ENST00000495947 347 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.65□□□□□ -1.18
COL4A5P29400 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.65□□□□□ -1.18
COL4A5P29400 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.65□□□□□ -1.18
COL4A5P29400 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.65□□□□□ -1.18
COL4A5P29400 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 AC090236.2-201ENST00000587933 1101 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 AC092681.3-201ENST00000609463 678 ntBASIC7.65□□□□□ -1.18
COL4A5P29400 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.65□□□□□ -1.18
COL4A5P29400 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL4A5P29400 AL035555.1-201ENST00000404462 1790 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms