Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 WBP1LP11-201ENST00000586141 328 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC020914.7-201ENST00000594477 545 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL669831.5-218ENST00000591702 1873 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC007993.1-201ENST00000621298 2430 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC010894.1-201ENST00000313760 361 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 PPIAP26-201ENST00000377951 522 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 FDPSP5-201ENST00000399474 1057 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 RPL24P2-201ENST00000421023 475 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC010086.1-201ENST00000437359 1052 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 RBMY2HP-201ENST00000457961 720 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 RN7SL834P-201ENST00000461450 286 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC021733.2-201ENST00000518830 497 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC116917.1-201ENST00000520558 305 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 OR9L1P-201ENST00000529493 933 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC016144.1-201ENST00000548175 1087 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC004908.1-201ENST00000606572 541 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AL354950.1-201ENST00000614150 568 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC068213.1-201ENST00000625124 226 ntBASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPIPA3F8WFD2 AL449283.1-201ENST00000602631 3403 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 UBTFL2-201ENST00000411859 1191 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC009500.1-201ENST00000420684 583 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 VN1R53P-201ENST00000429536 957 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AL590128.1-201ENST00000433407 286 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC245291.3-201ENST00000443400 292 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 CEACAMP5-201ENST00000448037 961 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC098818.1-201ENST00000478593 252 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 RPL29P23-201ENST00000486188 442 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AL117692.1-201ENST00000494283 713 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms