Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AC005224.3-201ENST00000584683 2140 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AL391422.1-201ENST00000402155 436 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 RN7SKP125-201ENST00000410481 302 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 RPL36AP39-201ENST00000445859 318 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AP005202.1-201ENST00000489915 867 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AP002884.5-201ENST00000595053 1132 ntBASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.14□□□□□ -1.43
CHD8Q9HCK8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 PTMAP1-205ENST00000455552 325 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC034236.1-201ENST00000469891 373 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 CBX1P5-201ENST00000475330 559 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AP004607.2-201ENST00000533949 322 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MIR4330-201ENST00000579077 105 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC104695.2-201ENST00000605056 775 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL355333.1-201ENST00000605632 279 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL022394.1-201ENST00000606979 292 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL035661.1-201ENST00000620459 1144 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL391988.1-201ENST00000614747 1553 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC087501.5-201ENST00000607496 2374 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AL451064.2-201ENST00000623514 1654 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 BECN1P2-201ENST00000407947 812 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC007386.1-201ENST00000455212 582 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 ACA64.1-201ENST00000459171 127 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 RPL19P11-201ENST00000495944 589 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 RN7SL466P-201ENST00000497546 295 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 TVP23CP2-201ENST00000571473 623 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC079395.2-201ENST00000610982 737 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 MIR6809-201ENST00000612189 116 ntBASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHD8Q9HCK8 AC106872.5-201ENST00000508856 1416 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms