Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 PCNAP3-201ENST00000397222 778 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 RNA5SP115-201ENST00000411160 107 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 RPS17P17-201ENST00000419392 409 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC017007.1-201ENST00000511960 415 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC007494.1-201ENST00000562293 760 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 AL355834.1-201ENST00000556602 3965 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 BX284613.1-201ENST00000452221 1641 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 AC074141.1-201ENST00000588129 2995 ntBASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 AC137056.2-201ENST00000624055 1958 ntBASIC6.46□□□□□ -1.37
CCDC28BQ9BUN5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 SNORA38B-201ENST00000363524 131 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 TMA16P2-201ENST00000413187 601 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 HMGA1P8-201ENST00000414130 321 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 CYCSP52-201ENST00000422857 310 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 MRPS21P2-201ENST00000424704 264 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC092066.1-201ENST00000425131 317 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 Z68868.1-201ENST00000429048 544 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 RPSAP24-201ENST00000461543 873 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL308P-201ENST00000464971 297 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL815P-201ENST00000470970 290 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 PHBP2-201ENST00000532859 806 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 NPM1P5-201ENST00000557228 838 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC011447.2-201ENST00000592921 283 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC092032.1-201ENST00000603090 165 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 CARSP1-201ENST00000603171 889 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AL157899.1-201ENST00000604110 936 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AL136139.1-201ENST00000605568 222 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC093671.1-201ENST00000624981 2929 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 AL356585.10-201ENST00000641883 123 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 DLEU2L-201ENST00000371086 3555 ntBASIC6.46□□□□□ -1.38
CCDC28BQ9BUN5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 NPM1P14-201ENST00000343743 866 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 NPM1P37-201ENST00000403105 874 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AL035467.1-201ENST00000403583 686 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 TYMSP1-201ENST00000407851 869 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 RNA5SP177-201ENST00000410122 107 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 GAPDHP57-201ENST00000424400 585 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 PAICSP2-201ENST00000429118 1150 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 AL590399.4-201ENST00000436561 601 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 snoU13.29-201ENST00000459370 104 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 RPL7P17-201ENST00000470927 724 ntBASIC6.45□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL282P-201ENST00000479676 297 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms