Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 API5P1-201ENST00000424316 1510 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AP003119.3-201ENST00000566747 4192 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 RNU1-55P-201ENST00000365510 158 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 RPL9P21-201ENST00000392269 505 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 PRELID1P2-201ENST00000407805 396 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 SNORA81-201ENST00000408493 178 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 PAICSP2-201ENST00000429118 1150 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 UBE2V2P1-201ENST00000434717 398 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 RPL5P12-201ENST00000477071 851 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC021006.1-201ENST00000489849 553 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC112484.3-201ENST00000505910 329 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 TOMM20P1-201ENST00000534518 427 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 uc_338.31-201ENST00000615595 186 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 MIR6721-201ENST00000617181 87 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 MIR8089-201ENST00000620165 82 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC009948.5-201ENST00000624360 4406 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 AC092821.2-201ENST00000545710 2042 ntBASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRIM71Q2Q1W2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 RNA5SP77-201ENST00000365394 120 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 OR7E156P-201ENST00000400303 464 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 RN7SKP232-201ENST00000410170 290 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC016724.1-201ENST00000453215 421 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 RN7SL870P-201ENST00000460111 296 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 H3F3AP5-201ENST00000475267 429 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 RPL7AP23-201ENST00000482625 776 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 MAST4-IT1-201ENST00000514241 658 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 HSD3BP3-201ENST00000514706 994 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC084121.1-201ENST00000533882 835 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 AC130456.6-201ENST00000623745 765 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
TRIM71Q2Q1W2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms