Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
SUMO3P55854 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.42□□□□□ -1.38
SUMO3P55854 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SUMO3P55854 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC079178.2-201ENST00000439323 1624 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 OR4K17-201ENST00000315543 1032 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 SNORA72.3-201ENST00000365074 132 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SUMO3P55854 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 NPM1P38-201ENST00000403835 865 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 RN7SKP30-201ENST00000411373 334 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 CBX1P3-201ENST00000413296 527 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 SFR1P2-201ENST00000421841 730 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 GAPDHP69-201ENST00000425504 1008 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 GAPDHP75-201ENST00000433910 943 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 OR51P1P-201ENST00000447547 942 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AL627224.1-201ENST00000448334 444 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 SRP68P2-201ENST00000456184 254 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 NPM1P17-201ENST00000479221 602 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 RPL23AP8-201ENST00000479812 475 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC096743.1-201ENST00000485172 319 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 RPEP1-201ENST00000504507 658 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 TPT1P8-201ENST00000510120 555 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 PDCL3P1-201ENST00000534575 734 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC091304.5-201ENST00000568969 158 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.41□□□□□ -1.38
SUMO3P55854 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 RPAP2P1-201ENST00000603626 1168 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AF129408.1-201ENST00000608767 431 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AL121782.1-201ENST00000611242 413 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC130448.2-201ENST00000624082 374 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 AC026108.1-201ENST00000635444 547 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 AC243725.1-201ENST00000637164 436 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 AL021877.2-201ENST00000624442 10684 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 AC090774.4-201ENST00000578888 1372 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SUMO3P55854 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.41□□□□□ -1.38
SUMO3P55854 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SUMO3P55854 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SUMO3P55854 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 MTCO1P4-201ENST00000520516 1409 ntBASIC6.41□□□□□ -1.38
SUMO3P55854 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SUMO3P55854 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SUMO3P55854 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SUMO3P55854 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SUMO3P55854 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SUMO3P55854 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SUMO3P55854 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.4□□□□□ -1.38
SUMO3P55854 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms