Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CPS1P31327 AC007342.5-201ENST00000571340 2142 ntBASIC9.23□□□□□ -0.93
CPS1P31327 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CPS1P31327 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CPS1P31327 VTRNA3-1P-201ENST00000362552 102 ntBASIC9.22□□□□□ -0.93
CPS1P31327 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
CPS1P31327 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 DPPA2P3-201ENST00000411853 655 ntBASIC9.22□□□□□ -0.93
CPS1P31327 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.22□□□□□ -0.93
CPS1P31327 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC9.22□□□□□ -0.93
CPS1P31327 PFN1P6-201ENST00000476786 399 ntBASIC9.22□□□□□ -0.93
CPS1P31327 RN7SL382P-201ENST00000482631 282 ntBASIC9.22□□□□□ -0.93
CPS1P31327 RNA5SP34-201ENST00000516887 130 ntBASIC9.22□□□□□ -0.93
CPS1P31327 PVT1-214ENST00000522875 922 ntTSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC9.22□□□□□ -0.93
CPS1P31327 AP003396.4-201ENST00000527574 265 ntBASIC9.22□□□□□ -0.93
CPS1P31327 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.22□□□□□ -0.93
CPS1P31327 AC106785.4-201ENST00000569492 412 ntBASIC9.22□□□□□ -0.93
CPS1P31327 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC9.22□□□□□ -0.93
CPS1P31327 AL356986.1-201ENST00000604085 341 ntBASIC9.22□□□□□ -0.93
CPS1P31327 LINC02495-203ENST00000636704 242 ntBASIC9.22□□□□□ -0.93
CPS1P31327 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 RN7SKP23-201ENST00000625159 4301 ntBASIC9.22□□□□□ -0.93
CPS1P31327 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
CPS1P31327 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC9.22□□□□□ -0.93
CPS1P31327 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CPS1P31327 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
CPS1P31327 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CPS1P31327 Z83820.1-201ENST00000456978 1499 ntBASIC9.21□□□□□ -0.93
CPS1P31327 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
CPS1P31327 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CPS1P31327 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC9.21□□□□□ -0.93
CPS1P31327 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC9.21□□□□□ -0.93
CPS1P31327 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CPS1P31327 SDHDP6-201ENST00000414693 480 ntBASIC9.21□□□□□ -0.93
CPS1P31327 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC9.21□□□□□ -0.93
CPS1P31327 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC9.21□□□□□ -0.93
CPS1P31327 RPL19P11-201ENST00000495944 589 ntBASIC9.21□□□□□ -0.93
CPS1P31327 AC112191.2-201ENST00000522428 333 ntBASIC9.21□□□□□ -0.93
CPS1P31327 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC9.21□□□□□ -0.93
CPS1P31327 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CPS1P31327 AC079600.1-201ENST00000550326 297 ntBASIC9.21□□□□□ -0.93
CPS1P31327 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC9.21□□□□□ -0.93
CPS1P31327 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.21□□□□□ -0.93
CPS1P31327 AC010327.2-201ENST00000587647 488 ntBASIC9.21□□□□□ -0.93
CPS1P31327 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CPS1P31327 CTH-203ENST00000411986 2044 ntTSL 2 BASIC9.21□□□□□ -0.93
CPS1P31327 OR4C1P-202ENST00000641065 1569 ntBASIC9.21□□□□□ -0.93
CPS1P31327 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CPS1P31327 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CPS1P31327 OFD1P15Y-201ENST00000411536 1392 ntBASIC9.21□□□□□ -0.94
CPS1P31327 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
CPS1P31327 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
CPS1P31327 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.21□□□□□ -0.94
CPS1P31327 AL359922.2-201ENST00000581788 3017 ntBASIC9.21□□□□□ -0.94
CPS1P31327 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CPS1P31327 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CPS1P31327 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
CPS1P31327 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
CPS1P31327 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.94
CPS1P31327 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.21□□□□□ -0.94
CPS1P31327 U3.43-201ENST00000410734 213 ntBASIC9.21□□□□□ -0.94
CPS1P31327 AC244452.1-201ENST00000413798 141 ntBASIC9.21□□□□□ -0.94
CPS1P31327 AC239367.3-201ENST00000428996 814 ntBASIC9.21□□□□□ -0.94
CPS1P31327 RPSAP37-201ENST00000470913 821 ntBASIC9.21□□□□□ -0.94
CPS1P31327 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.21□□□□□ -0.94
CPS1P31327 SCARNA18.1-201ENST00000516330 83 ntBASIC9.21□□□□□ -0.94
CPS1P31327 IGLV2-28-201ENST00000520681 304 ntBASIC9.21□□□□□ -0.94
CPS1P31327 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC9.21□□□□□ -0.94
CPS1P31327 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC9.21□□□□□ -0.94
CPS1P31327 RN7SL787P-201ENST00000613000 284 ntBASIC9.21□□□□□ -0.94
CPS1P31327 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC9.21□□□□□ -0.94
CPS1P31327 AC131009.3-201ENST00000621809 287 ntBASIC9.21□□□□□ -0.94
CPS1P31327 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CPS1P31327 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CPS1P31327 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.2□□□□□ -0.94
CPS1P31327 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.2□□□□□ -0.94
CPS1P31327 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CPS1P31327 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.94
CPS1P31327 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CPS1P31327 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC9.2□□□□□ -0.94
CPS1P31327 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC9.2□□□□□ -0.94
CPS1P31327 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
CPS1P31327 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CPS1P31327 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CPS1P31327 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms