Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DMAP28067 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
HLA-DMAP28067 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DMAP28067 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HLA-DMAP28067 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DMAP28067 AC120036.2-201ENST00000509729 1474 ntBASIC5.71□□□□□ -1.49
HLA-DMAP28067 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.71□□□□□ -1.49
HLA-DMAP28067 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 RNU1-21P-201ENST00000363327 163 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 SETP9-201ENST00000423837 832 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 RPSAP62-201ENST00000432596 833 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 ATP5G1P6-201ENST00000451206 412 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 IGKV2OR22-4-201ENST00000523309 367 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC007537.1-201ENST00000539347 327 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC025857.2-201ENST00000602711 238 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 RN7SL778P-201ENST00000607160 297 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AL513523.1-201ENST00000417868 1309 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DMAP28067 RACGAP1P-201ENST00000550663 1879 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DMAP28067 AC020658.2-201ENST00000559030 4020 ntBASIC5.71□□□□□ -1.5
HLA-DMAP28067 Z97989.1-201ENST00000531702 2421 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC024651.2-201ENST00000562480 2098 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AL451064.2-201ENST00000623514 1654 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DMAP28067 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 TRGV5P-201ENST00000419915 354 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AL590399.2-201ENST00000427536 309 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 RPL12P16-201ENST00000431098 498 ntBASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DMAP28067 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms