Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TPM3P06753 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TPM3P06753 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM3P06753 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM3P06753 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM3P06753 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TPM3P06753 AP002512.4-202ENST00000641599 4530 ntBASIC7.4□□□□□ -1.22
TPM3P06753 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM3P06753 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM3P06753 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM3P06753 SNORA70.5-201ENST00000365519 135 ntBASIC7.4□□□□□ -1.22
TPM3P06753 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
TPM3P06753 RPS3AP5-201ENST00000389400 821 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AL035467.1-201ENST00000403583 686 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AL023284.3-201ENST00000407767 334 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 AC007365.2-201ENST00000428806 458 ntBASIC7.4□□□□□ -1.22
TPM3P06753 KRT18P53-201ENST00000431919 117 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 AL354714.5-201ENST00000450131 590 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM3P06753 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 RPL23AP68-201ENST00000480924 445 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 AP001803.1-201ENST00000525668 147 ntBASIC7.4□□□□□ -1.22
TPM3P06753 PHBP2-201ENST00000532859 806 ntBASIC7.4□□□□□ -1.22
TPM3P06753 HIGD1AP9-201ENST00000550710 279 ntBASIC7.4□□□□□ -1.22
TPM3P06753 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 MIR4786-201ENST00000583954 80 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC006116.6-201ENST00000593258 1103 ntBASIC7.4□□□□□ -1.22
TPM3P06753 COX6CP16-201ENST00000603667 216 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC025171.4-201ENST00000607250 1047 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC087893.2-201ENST00000623272 255 ntBASIC7.4□□□□□ -1.22
TPM3P06753 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM3P06753 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM3P06753 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM3P06753 AL353763.1-201ENST00000624467 1628 ntBASIC7.4□□□□□ -1.22
TPM3P06753 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TPM3P06753 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
TPM3P06753 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TPM3P06753 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.4□□□□□ -1.23
TPM3P06753 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TPM3P06753 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TPM3P06753 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TPM3P06753 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 AC093297.3-201ENST00000607056 2517 ntBASIC7.39□□□□□ -1.23
TPM3P06753 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 CASC19-228ENST00000641414 1684 ntBASIC7.39□□□□□ -1.23
TPM3P06753 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 AL512329.1-201ENST00000404600 1592 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM3P06753 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM3P06753 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TPM3P06753 RNU4-81P-201ENST00000363561 144 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RNU1-55P-201ENST00000365510 158 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RPL23AP17-201ENST00000401064 499 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM3P06753 PPIL1P1-201ENST00000423936 499 ntBASIC7.39□□□□□ -1.23
TPM3P06753 GAPDHP57-201ENST00000424400 585 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AC092066.1-201ENST00000425131 317 ntBASIC7.39□□□□□ -1.23
TPM3P06753 Z68868.1-201ENST00000429048 544 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AC018804.1-201ENST00000430381 618 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AL645936.2-201ENST00000430565 928 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AC105052.2-201ENST00000434317 794 ntBASIC7.39□□□□□ -1.23
TPM3P06753 MEF2AP1-201ENST00000454867 863 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RPSAP24-201ENST00000461543 873 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RN7SL308P-201ENST00000464971 297 ntBASIC7.39□□□□□ -1.23
TPM3P06753 SLC25A51P1-201ENST00000468432 871 ntBASIC7.39□□□□□ -1.23
TPM3P06753 RNA5SP278-201ENST00000517055 102 ntBASIC7.39□□□□□ -1.23
TPM3P06753 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM3P06753 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM3P06753 FAM30C-201ENST00000561158 410 ntBASIC7.39□□□□□ -1.23
TPM3P06753 EIF4A3P1-201ENST00000578499 647 ntBASIC7.39□□□□□ -1.23
TPM3P06753 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.39□□□□□ -1.23
TPM3P06753 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM3P06753 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 AL035410.2-201ENST00000604963 864 ntBASIC7.39□□□□□ -1.23
TPM3P06753 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM3P06753 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.39□□□□□ -1.23
TPM3P06753 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM3P06753 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TPM3P06753 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms