Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 TRIM51HP-202ENST00000530412 1823 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AP000568.1-201ENST00000282964 442 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 RNA5SP232-201ENST00000364144 119 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 RNA5SP85-201ENST00000365378 119 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC006511.2-201ENST00000388966 660 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC114755.4-201ENST00000439114 443 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 GAPDHP20-201ENST00000444107 1007 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AL358876.1-201ENST00000453364 1075 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC090589.1-201ENST00000473109 362 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 Vault.2-201ENST00000516519 98 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 MTND1P36-201ENST00000522384 936 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC130364.2-201ENST00000528639 604 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ULK4P2-202ENST00000564187 492 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC020978.7-201ENST00000575953 1187 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 RN7SL230P-201ENST00000580835 303 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC010998.3-201ENST00000613871 631 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 uc_338.29-201ENST00000615099 168 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 MIR6778-201ENST00000617912 73 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 AC073593.1-201ENST00000624500 411 ntBASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC187A0A096LP49 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 OR2AH1P-202ENST00000641232 2744 ntBASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 RNU1-65P-201ENST00000363919 148 ntBASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 GABARAPL3-201ENST00000412799 354 ntBASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 AL139158.1-201ENST00000424719 340 ntBASIC6.59□□□□□ -1.35
CCDC187A0A096LP49 AL121916.1-201ENST00000429405 308 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms