Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 RN7SKP161-201ENST00000411110 305 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ACA64.1-201ENST00000459171 127 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 RN7SL705P-201ENST00000481678 294 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 RN7SL184P-201ENST00000488308 297 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC022206.1-201ENST00000495947 347 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC010333.3-201ENST00000615100 402 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AL049697.3-201ENST00000406493 982 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ZNF322P1-201ENST00000568013 1209 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 AL136131.3-201ENST00000607600 188 ntBASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC6.62□□□□□ -1.35
CHD7Q9P2D1 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 RNA5SP65-201ENST00000363166 119 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 RNU1-49P-201ENST00000363468 159 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 RBBP4P4-201ENST00000398588 1289 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 SUMO2P3-201ENST00000438311 288 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 RPS12P17-201ENST00000438591 377 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL356801.1-201ENST00000559320 294 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AC091685.2-201ENST00000454924 864 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 OR9L1P-201ENST00000529493 933 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL357562.1-201ENST00000624911 609 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AC024587.1-201ENST00000505925 2157 ntBASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHD7Q9P2D1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CHD7Q9P2D1 AL132875.1-201ENST00000403623 949 ntBASIC6.6□□□□□ -1.35
CHD7Q9P2D1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.6□□□□□ -1.35
CHD7Q9P2D1 AC245884.2-201ENST00000426257 404 ntBASIC6.6□□□□□ -1.35
CHD7Q9P2D1 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.6□□□□□ -1.35
CHD7Q9P2D1 AC026254.2-201ENST00000475295 371 ntBASIC6.6□□□□□ -1.35
CHD7Q9P2D1 RPL23AP68-201ENST00000480924 445 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms