Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 RN7SKP189-201ENST00000365042 330 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 RPL7AP71-201ENST00000451120 739 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 RN7SL216P-201ENST00000471607 298 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 MRPS21P9-201ENST00000571150 257 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 MIR378C-201ENST00000578683 81 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 MIR3159-201ENST00000584572 74 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 OR7E19P-202ENST00000589942 844 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC079414.3-201ENST00000612986 1090 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 AC022034.1-201ENST00000512867 2156 ntBASIC6.9□□□□□ -1.3
PCDH9Q9HC56 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDH9Q9HC56 LCOR-201ENST00000286067 4542 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC004014.2-201ENST00000623718 5122 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 STAG3L4-201ENST00000352103 530 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AL136100.1-201ENST00000407696 330 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 SETP22-201ENST00000412243 957 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 RPLP1P10-201ENST00000413972 339 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 GAPDHP57-201ENST00000424400 585 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 PAICSP2-201ENST00000429118 1150 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 RN7SL654P-201ENST00000479178 292 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 RPL23AP68-201ENST00000480924 445 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC074386.1-206ENST00000487102 761 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 SNX18P23-201ENST00000510867 677 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AC011921.2-201ENST00000589465 152 ntBASIC6.89□□□□□ -1.31
PCDH9Q9HC56 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH9Q9HC56 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 FAM32BP-201ENST00000344033 333 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 OR52N3P-201ENST00000413417 934 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AL139415.1-201ENST00000424862 352 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC009303.1-201ENST00000426307 352 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AL845321.1-201ENST00000444603 348 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 RPL23AP28-201ENST00000448062 470 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC009244.1-201ENST00000450566 258 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC008868.1-201ENST00000509786 737 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms