Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MARK2P8-201ENST00000476069 952 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AP005639.1-201ENST00000526939 192 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 OR7E161P-201ENST00000533722 967 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AP001120.4-201ENST00000590231 108 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 RPS27AP19-201ENST00000597285 458 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 RN7SL820P-201ENST00000616437 299 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 ZNF969P-201ENST00000510345 2341 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AL512353.3-201ENST00000417517 1326 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 CASC19-228ENST00000641414 1684 ntBASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC28BQ9BUN5 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RNA5SP442-201ENST00000365050 107 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 OR7E91P-201ENST00000400027 866 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AL023284.3-201ENST00000407767 334 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC007365.2-201ENST00000428806 458 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AF274573.1-201ENST00000430535 494 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 KRT18P53-201ENST00000431919 117 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC105052.2-201ENST00000434317 794 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC108751.3-201ENST00000461814 1020 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RPS26P11-201ENST00000463445 348 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC090058.1-201ENST00000498788 435 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RN7SKP11-201ENST00000517018 287 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 IGHV1-14-201ENST00000523391 241 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RN7SL664P-201ENST00000584239 305 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC011921.2-201ENST00000589465 152 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC012100.3-201ENST00000624738 575 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC105749.1-201ENST00000631338 2008 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 AC018628.1-201ENST00000624147 3819 ntBASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC28BQ9BUN5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 RNA5SP350-201ENST00000363298 111 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 SNORA55-201ENST00000364587 135 ntBASIC6.47□□□□□ -1.37
CCDC28BQ9BUN5 RNU1-55P-201ENST00000365510 158 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms