Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL953862.2-201ENST00000603089 820 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 AC007255.2-201ENST00000604053 631 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 AL137246.2-201ENST00000613439 662 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 AC068234.2-201ENST00000619646 522 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
AP1S3Q96PC3 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5□□□□□ -1.61
AP1S3Q96PC3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5□□□□□ -1.61
AP1S3Q96PC3 AC119674.1-209ENST00000642031 997 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
AP1S3Q96PC3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5□□□□□ -1.61
AP1S3Q96PC3 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5□□□□□ -1.61
AP1S3Q96PC3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5□□□□□ -1.61
AP1S3Q96PC3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP1S3Q96PC3 AL022322.2-201ENST00000624072 20397 ntBASIC5□□□□□ -1.61
AP1S3Q96PC3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AL513523.1-201ENST00000417868 1309 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC090220.1-201ENST00000593078 1699 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 WDR95P-201ENST00000425638 1542 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 LSM3P3-201ENST00000436601 306 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 TCEAL4P1-201ENST00000453620 588 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PABPC1P10-201ENST00000464731 381 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 TAAR3P-201ENST00000466706 1078 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 IGLV3-6-201ENST00000523937 250 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AP003041.2-201ENST00000525666 1180 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AP003499.1-201ENST00000527217 574 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 RN7SL760P-201ENST00000607344 270 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC245407.2-201ENST00000614199 451 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC124944.3-204ENST00000641191 150 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC024651.2-201ENST00000562480 2098 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 AC009120.2-204ENST00000621548 2032 ntBASIC4.99□□□□□ -1.61
AP1S3Q96PC3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.99□□□□□ -1.61
AP1S3Q96PC3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC006213.6-201ENST00000623722 4179 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC005725.1-201ENST00000577346 2607 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 OR5E1P-201ENST00000305754 927 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RPL24P4-201ENST00000326586 421 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RNA5SP188-201ENST00000362916 129 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 CES5AP1-201ENST00000400418 859 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms