Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.14□□□□□ -1.43
SPTA1P02549 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.14□□□□□ -1.43
SPTA1P02549 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.14□□□□□ -1.43
SPTA1P02549 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.14□□□□□ -1.43
SPTA1P02549 SHQ1P1-201ENST00000437111 1544 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SPTA1P02549 AC011592.1-201ENST00000624647 3634 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.14□□□□□ -1.43
SPTA1P02549 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
SPTA1P02549 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.14□□□□□ -1.43
SPTA1P02549 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 MIR323A-201ENST00000362199 86 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.14□□□□□ -1.43
SPTA1P02549 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.14□□□□□ -1.43
SPTA1P02549 COX4I1P2-201ENST00000447446 547 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 RPL12P31-201ENST00000478433 450 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.14□□□□□ -1.43
SPTA1P02549 AP005212.3-201ENST00000619964 528 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.14□□□□□ -1.43
SPTA1P02549 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 OR9K1P-201ENST00000326513 941 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 RNA5SP321-201ENST00000362722 111 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 U3.52-201ENST00000384034 216 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.13□□□□□ -1.43
SPTA1P02549 SDHCP3-201ENST00000445371 506 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 RBMY3AP-201ENST00000449381 1145 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 OTX2P1-201ENST00000450956 354 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 PGAM4P2-201ENST00000512491 721 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 AC022826.1-201ENST00000519383 805 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 EIF4A2P5-201ENST00000529914 499 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC211433.2-201ENST00000608433 387 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 AC127024.6-201ENST00000621598 424 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC123769.2-201ENST00000624332 5984 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 AC093225.1-201ENST00000506867 1408 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.13□□□□□ -1.43
SPTA1P02549 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC6.13□□□□□ -1.43
SPTA1P02549 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SPTA1P02549 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.13□□□□□ -1.43
SPTA1P02549 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.13□□□□□ -1.43
SPTA1P02549 LYPLA1P3-201ENST00000402650 695 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SPTA1P02549 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.13□□□□□ -1.43
SPTA1P02549 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.13□□□□□ -1.43
SPTA1P02549 SNORD96A-201ENST00000606577 79 ntBASIC6.13□□□□□ -1.43
SPTA1P02549 NLRP9P1-201ENST00000540920 2655 ntBASIC6.12□□□□□ -1.43
SPTA1P02549 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
SPTA1P02549 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.12□□□□□ -1.43
SPTA1P02549 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SPTA1P02549 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms