Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL157899.1-201ENST00000604110 936 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN2BO60939 AC245407.2-201ENST00000614199 451 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AC007347.2-201ENST00000623044 180 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN2BO60939 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 MKI67P1-201ENST00000604297 1460 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SCN2BO60939 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN2BO60939 AC005332.9-201ENST00000620266 2921 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 AC110373.1-201ENST00000505994 3505 ntBASIC6.32□□□□□ -1.4
SCN2BO60939 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN2BO60939 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 AL139384.2-201ENST00000613809 3590 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 AL117378.2-201ENST00000622916 1337 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 RNA5SP188-201ENST00000362916 129 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 MIR99A-201ENST00000384906 81 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 RNA5SP176-201ENST00000390956 110 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 AC017035.1-201ENST00000411999 1115 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.31□□□□□ -1.4
SCN2BO60939 GAPDHP57-201ENST00000424400 585 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 AL139415.1-201ENST00000424862 352 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 PAICSP2-201ENST00000429118 1150 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 RPS10P21-201ENST00000430654 475 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.31□□□□□ -1.4
SCN2BO60939 AC027124.1-201ENST00000440852 466 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.31□□□□□ -1.4
SCN2BO60939 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.31□□□□□ -1.4
SCN2BO60939 RPS26P11-201ENST00000463445 348 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 RPS26P6-201ENST00000475156 348 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 H3F3AP3-201ENST00000497682 407 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.31□□□□□ -1.4
SCN2BO60939 HNRNPCP8-201ENST00000528764 888 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.31□□□□□ -1.4
SCN2BO60939 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.31□□□□□ -1.4
SCN2BO60939 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN2BO60939 RN7SL270P-201ENST00000579643 281 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 AC097467.4-201ENST00000605504 141 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN2BO60939 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.31□□□□□ -1.4
SCN2BO60939 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.31□□□□□ -1.4
SCN2BO60939 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SCN2BO60939 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 NEK2P2-201ENST00000438441 1338 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 AC062022.1-201ENST00000451026 1684 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SCN2BO60939 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.3□□□□□ -1.4
SCN2BO60939 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SCN2BO60939 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 CYCSP52-201ENST00000422857 310 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 ETF1P1-206ENST00000427296 984 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SCN2BO60939 AC239800.1-201ENST00000442049 719 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.3□□□□□ -1.4
SCN2BO60939 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.3□□□□□ -1.4
SCN2BO60939 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.3□□□□□ -1.4
SCN2BO60939 RN7SL456P-201ENST00000469290 295 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 RPL23AP64-201ENST00000469465 435 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 RN7SL654P-201ENST00000479178 292 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 AC010409.2-201ENST00000505780 478 ntBASIC6.3□□□□□ -1.4
SCN2BO60939 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.3□□□□□ -1.4
SCN2BO60939 RPL7L1P7-201ENST00000509986 724 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms