Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 SPRYD7P1-201ENST00000443861 570 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 RNA5SP434-201ENST00000516647 121 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AC007956.1-201ENST00000555623 542 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 MIR378J-201ENST00000611988 109 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 uc_338.18-201ENST00000615451 175 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AL512652.1-201ENST00000619006 500 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AC245060.6-201ENST00000624350 8420 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 MAPK10-285ENST00000641207 2746 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 MRPS17P1-201ENST00000596009 3130 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 RNA5SP500-201ENST00000364486 119 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 PAICSP2-201ENST00000429118 1150 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC002504.1-201ENST00000438281 691 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 UBTFL11-201ENST00000428234 2252 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 U3.7-201ENST00000363668 216 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MIR1203-201ENST00000408812 85 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 DHFRP2-201ENST00000414224 547 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC012519.1-201ENST00000424588 610 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 CXCR2P1-202ENST00000443392 1074 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 RPS17P15-201ENST00000475609 349 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MIR6793-201ENST00000612376 63 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 CYP2G2P-201ENST00000594920 1485 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 AC025470.1-201ENST00000510053 2032 ntBASIC6.17□□□□□ -1.42
CHD8Q9HCK8 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.17□□□□□ -1.42
CHD8Q9HCK8 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD8Q9HCK8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD8Q9HCK8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHD8Q9HCK8 RN7SL834P-201ENST00000461450 286 ntBASIC6.16□□□□□ -1.42
CHD8Q9HCK8 AC083806.1-201ENST00000468934 316 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms