Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 RPSAP44-201ENST00000406712 884 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 OR5W1P-201ENST00000423705 938 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC009299.1-201ENST00000429684 717 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC008677.3-201ENST00000519146 666 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC110056.1-201ENST00000525759 911 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 OR5F2P-201ENST00000532761 941 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC011270.1-201ENST00000558606 583 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 RN7SL697P-201ENST00000582484 299 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC010463.3-201ENST00000594077 500 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AL136097.3-201ENST00000611097 505 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC116165.3-201ENST00000614524 400 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC098590.2-201ENST00000614787 281 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 pRNA.9-201ENST00000618609 89 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AC243960.7-201ENST00000623532 707 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 AL354702.2-202ENST00000641481 890 ntBASIC6.08□□□□□ -1.44
C11orf88Q6PI97 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
C11orf88Q6PI97 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RNA5SP333-201ENST00000363466 118 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RN7SKP257-201ENST00000364525 309 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RNA5SP334-201ENST00000364825 118 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RNA5SP355-201ENST00000365317 135 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RN7SKP62-201ENST00000384539 329 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 MIR541-201ENST00000401360 84 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 RN7SKP236-201ENST00000410635 284 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LIN28AP2-201ENST00000445283 458 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 GTF2F2P2-201ENST00000445825 721 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 OR10J9P-201ENST00000511932 987 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 SUMO2P19-201ENST00000518920 295 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 SNX18P27-201ENST00000523611 779 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 OR9L1P-201ENST00000529493 933 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC011611.6-201ENST00000547483 255 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC023827.2-201ENST00000566880 1061 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AL031429.2-201ENST00000602605 649 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 OR7M1P-201ENST00000608946 533 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AL159169.2-201ENST00000610061 1269 ntBASIC6.07□□□□□ -1.44
C11orf88Q6PI97 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
C11orf88Q6PI97 CLCA3P-203ENST00000490028 2781 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms