Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ARID1B-209ENST00000494260 696 ntTSL 39.59□□□□□ -0.874e-7■□□□□ 9.7
PRPF8Q6P2Q9 ARID1B-217ENST00000636607 406 ntTSL 36.95□□□□□ -1.34e-7■□□□□ 9.7
PRPF8Q6P2Q9 ARID1B-233ENST00000637910 576 ntTSL 26.04□□□□□ -1.444e-7■□□□□ 9.7
PRPF8Q6P2Q9 ALDH18A1-204ENST00000485428 726 ntTSL 27.1□□□□□ -1.272e-7■□□□□ 9.7
PRPF8Q6P2Q9 SLC22A31-205ENST00000603735 791 ntTSL 314.6□□□□□ -0.075e-27■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-209ENST00000574205 1506 ntTSL 527.73■■■□□ 2.035e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.275e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.185e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.155e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.86□□□□□ -0.035e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-211ENST00000575783 876 ntTSL 514.61□□□□□ -0.075e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-212ENST00000576613 606 ntTSL 310.27□□□□□ -0.775e-8■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-202ENST00000463880 641 ntTSL 317.36■□□□□ 0.373e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.653e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-208ENST00000495354 495 ntTSL 310.59□□□□□ -0.713e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-207ENST00000493378 548 ntTSL 39□□□□□ -0.973e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.87□□□□□ -1.473e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-205ENST00000488156 732 ntTSL 35.76□□□□□ -1.493e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-204ENST00000486310 1601 ntTSL 35.66□□□□□ -1.53e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.01□□□□□ -1.933e-14■□□□□ 9.7
PRPF8Q6P2Q9 ARF4-203ENST00000483848 404 ntTSL 52.2□□□□□ -2.063e-14■□□□□ 9.7
PRPF8Q6P2Q9 SOD1-203ENST00000470944 1746 ntTSL 223.67■■□□□ 1.384e-6■□□□□ 9.7
PRPF8Q6P2Q9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.914e-6■□□□□ 9.7
PRPF8Q6P2Q9 GMFB-203ENST00000553566 391 ntTSL 520.67■□□□□ 0.94e-6■□□□□ 9.7
PRPF8Q6P2Q9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.864e-6■□□□□ 9.7
PRPF8Q6P2Q9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.13■□□□□ 0.814e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.34■□□□□ 0.694e-6■□□□□ 9.7
PRPF8Q6P2Q9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.34■□□□□ 0.694e-6■□□□□ 9.7
PRPF8Q6P2Q9 KLF16-202ENST00000541015 1134 ntTSL 1 (best)19.24■□□□□ 0.674e-6■□□□□ 9.7
PRPF8Q6P2Q9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.644e-6■□□□□ 9.7
PRPF8Q6P2Q9 AKT1-217ENST00000557494 408 ntTSL 218.66■□□□□ 0.584e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLPBP-202ENST00000518036 558 ntTSL 418.6■□□□□ 0.574e-6■□□□□ 9.7
PRPF8Q6P2Q9 UTRN-208ENST00000433557 354 ntTSL 418.43■□□□□ 0.544e-6■□□□□ 9.7
PRPF8Q6P2Q9 ARRB2-215ENST00000574888 509 ntTSL 418.2■□□□□ 0.54e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-215ENST00000474763 582 ntTSL 517.95■□□□□ 0.464e-6■□□□□ 9.7
PRPF8Q6P2Q9 CAPN10-213ENST00000465943 549 ntTSL 417.69■□□□□ 0.424e-6■□□□□ 9.7
PRPF8Q6P2Q9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.384e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLPBP-206ENST00000523187 569 ntTSL 317.14■□□□□ 0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 FGFR1OP2-203ENST00000395941 865 ntTSL 216.84■□□□□ 0.292e-7■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.78■□□□□ 0.284e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLPBP-209ENST00000523994 559 ntTSL 316.75■□□□□ 0.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.74■□□□□ 0.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.71■□□□□ 0.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLPBP-207ENST00000523358 516 ntTSL 216.56■□□□□ 0.244e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-202ENST00000440591 951 ntTSL 1 (best)16.4■□□□□ 0.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 RANGAP1-204ENST00000422838 946 ntTSL 316.38■□□□□ 0.214e-6■□□□□ 9.7
PRPF8Q6P2Q9 OSBPL7-207ENST00000580808 495 ntTSL 516.37■□□□□ 0.214e-6■□□□□ 9.7
PRPF8Q6P2Q9 ARRB2-211ENST00000572497 432 ntTSL 416.16■□□□□ 0.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-217ENST00000481440 728 ntTSL 316.12■□□□□ 0.174e-6■□□□□ 9.7
PRPF8Q6P2Q9 CNDP2-214ENST00000581600 500 ntTSL 216.07■□□□□ 0.164e-6■□□□□ 9.7
PRPF8Q6P2Q9 ARRB2-212ENST00000572782 523 ntTSL 315.88■□□□□ 0.134e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLPBP-203ENST00000520073 770 ntTSL 215.78■□□□□ 0.124e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.71■□□□□ 0.14e-6■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.084e-6■□□□□ 9.7
PRPF8Q6P2Q9 ARRB2-205ENST00000570718 564 ntTSL 415.48■□□□□ 0.074e-6■□□□□ 9.7
PRPF8Q6P2Q9 DNM1L-217ENST00000548671 750 ntTSL 315.37■□□□□ 0.054e-6■□□□□ 9.7
PRPF8Q6P2Q9 C21orf2-207ENST00000496321 1191 ntTSL 1 (best)15.37■□□□□ 0.054e-6■□□□□ 9.7
PRPF8Q6P2Q9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.26■□□□□ 0.034e-6■□□□□ 9.7
PRPF8Q6P2Q9 ORAOV1-212ENST00000542470 838 ntTSL 215.15■□□□□ 0.024e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-212ENST00000465449 1739 ntTSL 215.07■□□□□ 04e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-214ENST00000486344 713 ntTSL 214.98□□□□□ -0.014e-6■□□□□ 9.7
PRPF8Q6P2Q9 FAM189B-206ENST00000481822 2103 ntTSL 214.72□□□□□ -0.054e-6■□□□□ 9.7
PRPF8Q6P2Q9 PEPD-209ENST00000590755 547 ntTSL 314.66□□□□□ -0.064e-6■□□□□ 9.7
PRPF8Q6P2Q9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-6■□□□□ 9.7
PRPF8Q6P2Q9 DDX19A-207ENST00000565195 586 ntTSL 214.48□□□□□ -0.093e-10■□□□□ 9.7
PRPF8Q6P2Q9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.094e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.47□□□□□ -0.094e-6■□□□□ 9.7
PRPF8Q6P2Q9 SYS1-DBNDD2-201ENST00000419593 1313 ntAPPRIS ALT2 TSL 214.46□□□□□ -0.094e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-204ENST00000417962 2306 ntTSL 214.42□□□□□ -0.14e-6■□□□□ 9.7
PRPF8Q6P2Q9 ORAOV1-208ENST00000537324 625 ntTSL 314.42□□□□□ -0.14e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.35□□□□□ -0.114e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.35□□□□□ -0.114e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.114e-6■□□□□ 9.7
PRPF8Q6P2Q9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.124e-6■□□□□ 9.7
PRPF8Q6P2Q9 ARHGEF11-207ENST00000492592 864 ntTSL 314.26□□□□□ -0.134e-6■□□□□ 9.7
PRPF8Q6P2Q9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.164e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-209ENST00000474101 147 ntTSL 514.01□□□□□ -0.174e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.9□□□□□ -0.184e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-218ENST00000497863 972 ntTSL 213.89□□□□□ -0.194e-6■□□□□ 9.7
PRPF8Q6P2Q9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.89□□□□□ -0.194e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR3-210ENST00000575434 851 ntTSL 313.89□□□□□ -0.194e-6■□□□□ 9.7
PRPF8Q6P2Q9 PLSCR3-203ENST00000571078 724 ntTSL 213.86□□□□□ -0.194e-6■□□□□ 9.7
PRPF8Q6P2Q9 TGFA-202ENST00000394241 568 ntTSL 313.84□□□□□ -0.194e-6■□□□□ 9.7
PRPF8Q6P2Q9 SYS1-DBNDD2-203ENST00000458187 673 ntAPPRIS P5 TSL 513.81□□□□□ -0.24e-6■□□□□ 9.7
PRPF8Q6P2Q9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.78□□□□□ -0.22e-7■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.75□□□□□ -0.214e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-212ENST00000509333 743 ntTSL 213.7□□□□□ -0.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 PDLIM5-216ENST00000511767 463 ntTSL 513.7□□□□□ -0.224e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.42□□□□□ -0.264e-6■□□□□ 9.7
PRPF8Q6P2Q9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.39□□□□□ -0.274e-6■□□□□ 9.7
PRPF8Q6P2Q9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.33□□□□□ -0.284e-6■□□□□ 9.7
PRPF8Q6P2Q9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.314e-6■□□□□ 9.7
PRPF8Q6P2Q9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.01□□□□□ -0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-204ENST00000502933 440 ntTSL 313□□□□□ -0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL2-203ENST00000473093 543 ntTSL 412.97□□□□□ -0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 ORAOV1-207ENST00000537272 988 ntTSL 312.96□□□□□ -0.334e-6■□□□□ 9.7
PRPF8Q6P2Q9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.344e-6■□□□□ 9.7
PRPF8Q6P2Q9 NUDT9-205ENST00000512216 690 ntTSL 312.91□□□□□ -0.344e-6■□□□□ 9.7
Retrieved 100 of 73,762 protein–RNA pairs in 527.7 ms