RNA–Protein interactions for RNA: ENST00000637910.1

ARID1B-233, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 2

Gene ARID1B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-233ENST00000637910 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
ARID1B-233ENST00000637910 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
ARID1B-233ENST00000637910 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
ARID1B-233ENST00000637910 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
ARID1B-233ENST00000637910 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
ARID1B-233ENST00000637910 FOXD1Q16676 465 aa19.07■□□□□ 0.64
ARID1B-233ENST00000637910 ADRA2BP18089 450 aa18.47■□□□□ 0.55
ARID1B-233ENST00000637910 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
ARID1B-233ENST00000637910 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
ARID1B-233ENST00000637910 MSH5O43196 834 aa17.59■□□□□ 0.41
ARID1B-233ENST00000637910 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
ARID1B-233ENST00000637910 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
ARID1B-233ENST00000637910 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
ARID1B-233ENST00000637910 KCNA4P22459 653 aa16.99■□□□□ 0.31
ARID1B-233ENST00000637910 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
ARID1B-233ENST00000637910 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
ARID1B-233ENST00000637910 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
ARID1B-233ENST00000637910 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
ARID1B-233ENST00000637910 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
ARID1B-233ENST00000637910 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
ARID1B-233ENST00000637910 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
ARID1B-233ENST00000637910 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
ARID1B-233ENST00000637910 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
ARID1B-233ENST00000637910 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
ARID1B-233ENST00000637910 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
ARID1B-233ENST00000637910 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
ARID1B-233ENST00000637910 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
ARID1B-233ENST00000637910 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
ARID1B-233ENST00000637910 ZBTB22O15209 634 aa15.61■□□□□ 0.09
ARID1B-233ENST00000637910 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
ARID1B-233ENST00000637910 ABCC9O60706 1549 aa15.54■□□□□ 0.08
ARID1B-233ENST00000637910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
ARID1B-233ENST00000637910 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
ARID1B-233ENST00000637910 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
ARID1B-233ENST00000637910 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
ARID1B-233ENST00000637910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
ARID1B-233ENST00000637910 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
ARID1B-233ENST00000637910 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
ARID1B-233ENST00000637910 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
ARID1B-233ENST00000637910 RNF39Q9H2S5 420 aa15.04■□□□□ -0
ARID1B-233ENST00000637910 APLP2Q06481 763 aa15□□□□□ -0.01
ARID1B-233ENST00000637910 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
ARID1B-233ENST00000637910 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
ARID1B-233ENST00000637910 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
ARID1B-233ENST00000637910 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
ARID1B-233ENST00000637910 NACADO15069 1562 aa14.7□□□□□ -0.06
ARID1B-233ENST00000637910 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
ARID1B-233ENST00000637910 CAPN15O75808 1086 aa14.69□□□□□ -0.06
ARID1B-233ENST00000637910 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
ARID1B-233ENST00000637910 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
ARID1B-233ENST00000637910 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
ARID1B-233ENST00000637910 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
ARID1B-233ENST00000637910 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
ARID1B-233ENST00000637910 POLA2Q14181 598 aa14.46□□□□□ -0.09
ARID1B-233ENST00000637910 ABCB7O75027 752 aa14.39□□□□□ -0.11
ARID1B-233ENST00000637910 DSG3P32926 999 aa14.37□□□□□ -0.11
ARID1B-233ENST00000637910 FBLN2P98095 1184 aa14.3□□□□□ -0.12
ARID1B-233ENST00000637910 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
ARID1B-233ENST00000637910 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
ARID1B-233ENST00000637910 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
ARID1B-233ENST00000637910 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
ARID1B-233ENST00000637910 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
ARID1B-233ENST00000637910 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
ARID1B-233ENST00000637910 FKBP8Q14318 412 aa14.21□□□□□ -0.13
ARID1B-233ENST00000637910 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
ARID1B-233ENST00000637910 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
ARID1B-233ENST00000637910 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
ARID1B-233ENST00000637910 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
ARID1B-233ENST00000637910 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
ARID1B-233ENST00000637910 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
ARID1B-233ENST00000637910 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
ARID1B-233ENST00000637910 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
ARID1B-233ENST00000637910 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
ARID1B-233ENST00000637910 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
ARID1B-233ENST00000637910 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
ARID1B-233ENST00000637910 PROM2Q8N271 834 aa13.8□□□□□ -0.2
ARID1B-233ENST00000637910 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
ARID1B-233ENST00000637910 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
ARID1B-233ENST00000637910 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
ARID1B-233ENST00000637910 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
ARID1B-233ENST00000637910 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
ARID1B-233ENST00000637910 NCAPD3P42695 1498 aa13.59□□□□□ -0.23
ARID1B-233ENST00000637910 CUX2O14529 1486 aa13.57□□□□□ -0.24
ARID1B-233ENST00000637910 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
ARID1B-233ENST00000637910 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
ARID1B-233ENST00000637910 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
ARID1B-233ENST00000637910 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
ARID1B-233ENST00000637910 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
ARID1B-233ENST00000637910 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
ARID1B-233ENST00000637910 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
ARID1B-233ENST00000637910 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
ARID1B-233ENST00000637910 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
ARID1B-233ENST00000637910 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
ARID1B-233ENST00000637910 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
ARID1B-233ENST00000637910 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
ARID1B-233ENST00000637910 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
ARID1B-233ENST00000637910 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
ARID1B-233ENST00000637910 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
ARID1B-233ENST00000637910 MIER1Q8N108 512 aa13.3□□□□□ -0.28
ARID1B-233ENST00000637910 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms