Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RN7SL727P-201ENST00000482164 296 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TPRX1P1-201ENST00000557620 319 ntBASIC6.49□□□□□ -1.37
RIF1Q5UIP0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RIF1Q5UIP0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC129502.1-201ENST00000623261 1654 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AL355355.1-201ENST00000442900 793 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 RN7SL329P-201ENST00000467740 299 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 COX6CP7-201ENST00000597056 208 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 CR382285.1-202ENST00000604687 547 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 MAPK10-281ENST00000641170 3070 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC004491.1-201ENST00000623029 1882 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 RANP6-201ENST00000413691 644 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AL590004.3-202ENST00000445883 451 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AC093763.2-201ENST00000505334 1223 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.48□□□□□ -1.37
RIF1Q5UIP0 AL133399.1-201ENST00000527476 298 ntBASIC6.48□□□□□ -1.37
RIF1Q5UIP0 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 RNA5SP110-201ENST00000362638 115 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL450996.1-201ENST00000445574 1202 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 OR4C7P-201ENST00000533375 919 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AC073488.9-201ENST00000631601 754 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 AL451064.2-201ENST00000623514 1654 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 RN7SKP23-201ENST00000625159 4301 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 MAPK10-379ENST00000642013 1385 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.47□□□□□ -1.37
RIF1Q5UIP0 RNU6-171P-201ENST00000384354 107 ntBASIC6.47□□□□□ -1.37
RIF1Q5UIP0 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms