Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 AC138915.4-201ENST00000565549 4147 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL606490.1-201ENST00000452266 765 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 RN7SL326P-201ENST00000477493 296 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 RN7SL705P-201ENST00000481678 294 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 SETP21-201ENST00000514799 892 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 MTCO1P25-201ENST00000414449 1799 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 MIR550A3-201ENST00000390735 95 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL590762.1-201ENST00000391782 432 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL132875.1-201ENST00000403623 949 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL035660.1-201ENST00000422041 222 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 RPS4XP23-201ENST00000487801 237 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 OR51K1P-201ENST00000510214 950 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
BRCA2P51587 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 CASC19-228ENST00000641414 1684 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 RPL34P3-201ENST00000421454 338 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL583856.1-201ENST00000454078 1101 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 RN7SL172P-201ENST00000460535 303 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 AL512310.9-201ENST00000553311 948 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AL356801.1-201ENST00000559320 294 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AC005244.1-201ENST00000582566 339 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 FKBP1AP1-201ENST00000594588 318 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 AC092681.3-201ENST00000609463 678 ntBASIC6.91□□□□□ -1.3
BRCA2P51587 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BRCA2P51587 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
BRCA2P51587 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
BRCA2P51587 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 OR5BA1P-202ENST00000641215 5464 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 MAPK10-377ENST00000642006 2752 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 OR13C1P-202ENST00000641378 2919 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
BRCA2P51587 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.9□□□□□ -1.3
BRCA2P51587 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 HMGB1P20-201ENST00000402555 677 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.9□□□□□ -1.3
BRCA2P51587 SIAH1P1-201ENST00000479411 923 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.9□□□□□ -1.3
BRCA2P51587 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.9□□□□□ -1.3
BRCA2P51587 AL591767.3-201ENST00000554632 525 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 SPATA31E2P-201ENST00000554414 4965 ntBASIC6.9□□□□□ -1.3
BRCA2P51587 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
BRCA2P51587 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
BRCA2P51587 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.9□□□□□ -1.31
BRCA2P51587 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 XRCC6P5-201ENST00000435236 1795 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.9□□□□□ -1.31
BRCA2P51587 AL603650.1-201ENST00000412680 240 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 AL596448.1-201ENST00000415024 392 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.9□□□□□ -1.31
BRCA2P51587 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.9□□□□□ -1.31
BRCA2P51587 DNAJB5P1-201ENST00000454004 806 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 RPL35AP19-201ENST00000469425 329 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 CBX1P5-201ENST00000475330 559 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 AC010998.3-201ENST00000613871 631 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 AC090510.2-201ENST00000617465 629 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
BRCA2P51587 ARHGEF9-233ENST00000637520 5682 ntTSL 5 BASIC6.9□□□□□ -1.31
BRCA2P51587 NEPNP-201ENST00000404786 1371 ntBASIC6.9□□□□□ -1.31
BRCA2P51587 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
BRCA2P51587 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
BRCA2P51587 SON-203ENST00000381679 7860 ntTSL 5 BASIC6.89□□□□□ -1.31
BRCA2P51587 RNVU1-6-201ENST00000364688 164 ntBASIC6.89□□□□□ -1.31
BRCA2P51587 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BRCA2P51587 AC245884.2-201ENST00000426257 404 ntBASIC6.89□□□□□ -1.31
BRCA2P51587 ZNF619P1-201ENST00000446539 752 ntBASIC6.89□□□□□ -1.31
BRCA2P51587 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.89□□□□□ -1.31
BRCA2P51587 RPL7AP6-201ENST00000477943 801 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms