Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HTTP42858 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 U3.2-201ENST00000362981 210 ntBASIC6.94□□□□□ -1.3
HTTP42858 RNA5SP65-201ENST00000363166 119 ntBASIC6.94□□□□□ -1.3
HTTP42858 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 AC092865.4-201ENST00000477936 615 ntBASIC6.94□□□□□ -1.3
HTTP42858 AC112225.1-201ENST00000508230 297 ntBASIC6.94□□□□□ -1.3
HTTP42858 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 AC092865.1-201ENST00000544395 1023 ntBASIC6.94□□□□□ -1.3
HTTP42858 HMGN2P6-201ENST00000551091 273 ntBASIC6.94□□□□□ -1.3
HTTP42858 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.94□□□□□ -1.3
HTTP42858 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 AP001527.1-201ENST00000566440 1957 ntBASIC6.94□□□□□ -1.3
HTTP42858 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.94□□□□□ -1.3
HTTP42858 RPS26P41-201ENST00000450370 284 ntBASIC6.94□□□□□ -1.3
HTTP42858 AC093166.4-201ENST00000457867 318 ntBASIC6.94□□□□□ -1.3
HTTP42858 CR383656.6-201ENST00000550518 394 ntBASIC6.94□□□□□ -1.3
HTTP42858 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC6.94□□□□□ -1.3
HTTP42858 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HTTP42858 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HTTP42858 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HTTP42858 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 ZNF619P1-201ENST00000446539 752 ntBASIC6.94□□□□□ -1.3
HTTP42858 BX510359.5-201ENST00000515651 304 ntBASIC6.94□□□□□ -1.3
HTTP42858 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.94□□□□□ -1.3
HTTP42858 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.94□□□□□ -1.3
HTTP42858 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
HTTP42858 RN7SL544P-201ENST00000617232 284 ntBASIC6.94□□□□□ -1.3
HTTP42858 RN7SL763P-201ENST00000620922 284 ntBASIC6.94□□□□□ -1.3
HTTP42858 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
HTTP42858 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC6.94□□□□□ -1.3
HTTP42858 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
HTTP42858 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 AC245452.2-201ENST00000435222 392 ntBASIC6.93□□□□□ -1.3
HTTP42858 AL133445.1-201ENST00000467051 452 ntBASIC6.93□□□□□ -1.3
HTTP42858 RPL35AP19-201ENST00000469425 329 ntBASIC6.93□□□□□ -1.3
HTTP42858 AC022206.1-201ENST00000495947 347 ntBASIC6.93□□□□□ -1.3
HTTP42858 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 AC007204.2-201ENST00000615022 616 ntBASIC6.93□□□□□ -1.3
HTTP42858 CASC19-228ENST00000641414 1684 ntBASIC6.93□□□□□ -1.3
HTTP42858 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HTTP42858 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 CTH-203ENST00000411986 2044 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 MIR550A3-201ENST00000390735 95 ntBASIC6.93□□□□□ -1.3
HTTP42858 RN7SKP125-201ENST00000410481 302 ntBASIC6.93□□□□□ -1.3
HTTP42858 AK4P4-201ENST00000419465 646 ntBASIC6.93□□□□□ -1.3
HTTP42858 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.93□□□□□ -1.3
HTTP42858 GAPDHP71-201ENST00000511530 1003 ntBASIC6.93□□□□□ -1.3
HTTP42858 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 AC026367.2-201ENST00000610630 553 ntBASIC6.93□□□□□ -1.3
HTTP42858 OR1N1-202ENST00000619659 939 ntBASIC6.93□□□□□ -1.3
HTTP42858 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.93□□□□□ -1.3
HTTP42858 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
HTTP42858 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HTTP42858 AC009120.2-204ENST00000621548 2032 ntBASIC6.93□□□□□ -1.3
HTTP42858 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC6.93□□□□□ -1.3
HTTP42858 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms