Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.03□□□□□ -1.12
CNGA1P29973 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNGA1P29973 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CNGA1P29973 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CNGA1P29973 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
CNGA1P29973 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.12
CNGA1P29973 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNGA1P29973 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CNGA1P29973 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNGA1P29973 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNGA1P29973 RNA5SP382-201ENST00000363355 112 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.02□□□□□ -1.13
CNGA1P29973 RNU6-1055P-201ENST00000391085 107 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 RPL12P43-201ENST00000420608 499 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.02□□□□□ -1.13
CNGA1P29973 AC007365.2-201ENST00000428806 458 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNGA1P29973 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.02□□□□□ -1.13
CNGA1P29973 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.02□□□□□ -1.13
CNGA1P29973 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 BX323845.2-201ENST00000458382 234 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AC117395.2-201ENST00000463122 1128 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 PGBD4P1-201ENST00000473644 407 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 RN7SL37P-201ENST00000490461 307 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.02□□□□□ -1.13
CNGA1P29973 RN7SKP11-201ENST00000517018 287 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.02□□□□□ -1.13
CNGA1P29973 FAM60CP-201ENST00000591086 664 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.02□□□□□ -1.13
CNGA1P29973 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CNGA1P29973 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AL590410.1-201ENST00000617925 333 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 AC027559.1-201ENST00000636288 271 ntBASIC8.02□□□□□ -1.13
CNGA1P29973 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.02□□□□□ -1.13
CNGA1P29973 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNGA1P29973 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.02□□□□□ -1.13
CNGA1P29973 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CNGA1P29973 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNGA1P29973 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CNGA1P29973 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.01□□□□□ -1.13
CNGA1P29973 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 RN7SKP130-201ENST00000364924 301 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.01□□□□□ -1.13
CNGA1P29973 AL359885.1-201ENST00000415786 903 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC8.01□□□□□ -1.13
CNGA1P29973 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 ZNF736P11Y-201ENST00000442535 1213 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 ZNF736P12Y-201ENST00000443152 1243 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 TIMM8BP2-201ENST00000445940 251 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CNGA1P29973 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC118758.1-202ENST00000454719 225 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 ZNF736P4Y-201ENST00000454995 1243 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 RN7SL390P-201ENST00000470634 284 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC117525.1-201ENST00000515228 503 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 IGLVI-42-201ENST00000522485 381 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 IGKV2-4-201ENST00000523070 340 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC121758.1-202ENST00000556917 658 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AC013283.1-201ENST00000557282 492 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 MTND4LP25-201ENST00000570218 163 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.01□□□□□ -1.13
CNGA1P29973 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.01□□□□□ -1.13
CNGA1P29973 GAPDHP41-201ENST00000613707 975 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 AC026367.3-201ENST00000619032 590 ntBASIC8.01□□□□□ -1.13
CNGA1P29973 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms