Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC040162.2-201ENST00000573092 157 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC024614.1-201ENST00000577546 307 ntBASIC6.47□□□□□ -1.37
CD40P25942 RN7SL835P-201ENST00000579920 262 ntBASIC6.47□□□□□ -1.37
CD40P25942 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 AC006116.6-201ENST00000593258 1103 ntBASIC6.47□□□□□ -1.37
CD40P25942 AL589765.5-201ENST00000596133 515 ntBASIC6.47□□□□□ -1.37
CD40P25942 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 AC024451.4-201ENST00000602578 752 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC025175.1-201ENST00000606482 759 ntBASIC6.47□□□□□ -1.37
CD40P25942 AC018690.1-201ENST00000608144 626 ntBASIC6.47□□□□□ -1.37
CD40P25942 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CD40P25942 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CD40P25942 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CD40P25942 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC6.47□□□□□ -1.37
CD40P25942 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 CIR1P2-201ENST00000514821 1342 ntBASIC6.47□□□□□ -1.37
CD40P25942 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CD40P25942 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 AC145138.1-201ENST00000512908 2851 ntBASIC6.47□□□□□ -1.37
CD40P25942 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CD40P25942 KARSP1-201ENST00000451871 1752 ntBASIC6.46□□□□□ -1.37
CD40P25942 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.46□□□□□ -1.37
CD40P25942 IST1-208ENST00000535424 4082 ntTSL 5 BASIC6.46□□□□□ -1.37
CD40P25942 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC6.46□□□□□ -1.37
CD40P25942 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CD40P25942 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.46□□□□□ -1.37
CD40P25942 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.46□□□□□ -1.37
CD40P25942 MTND4P8-201ENST00000514997 1362 ntBASIC6.46□□□□□ -1.37
CD40P25942 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CD40P25942 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CD40P25942 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CD40P25942 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CD40P25942 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 ATP5F1P2-201ENST00000398143 760 ntBASIC6.46□□□□□ -1.38
CD40P25942 UBE2V1P11-201ENST00000411559 285 ntBASIC6.46□□□□□ -1.38
CD40P25942 AL355862.1-201ENST00000412705 353 ntBASIC6.46□□□□□ -1.38
CD40P25942 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CD40P25942 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 AC005189.1-201ENST00000431286 310 ntBASIC6.46□□□□□ -1.38
CD40P25942 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.46□□□□□ -1.38
CD40P25942 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 SS18L2P1-201ENST00000445923 213 ntBASIC6.46□□□□□ -1.38
CD40P25942 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 CST12P-201ENST00000457644 362 ntBASIC6.46□□□□□ -1.38
CD40P25942 NDUFA5P9-201ENST00000472609 340 ntBASIC6.46□□□□□ -1.38
CD40P25942 AC008040.4-201ENST00000494834 768 ntBASIC6.46□□□□□ -1.38
CD40P25942 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.46□□□□□ -1.38
CD40P25942 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 AC026414.1-201ENST00000504046 698 ntBASIC6.46□□□□□ -1.38
CD40P25942 RNA5SP75-201ENST00000516841 111 ntBASIC6.46□□□□□ -1.38
CD40P25942 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 AC079064.1-201ENST00000528365 362 ntBASIC6.46□□□□□ -1.38
CD40P25942 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.46□□□□□ -1.38
CD40P25942 ATP5J2P4-201ENST00000538774 267 ntBASIC6.46□□□□□ -1.38
CD40P25942 TDGP1-201ENST00000543961 1229 ntBASIC6.46□□□□□ -1.38
CD40P25942 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.46□□□□□ -1.38
CD40P25942 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.46□□□□□ -1.38
CD40P25942 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.46□□□□□ -1.38
CD40P25942 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.46□□□□□ -1.38
CD40P25942 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 AC040904.1-201ENST00000590850 223 ntBASIC6.46□□□□□ -1.38
CD40P25942 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 FXYD6P1-201ENST00000604857 285 ntBASIC6.46□□□□□ -1.38
CD40P25942 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.46□□□□□ -1.38
CD40P25942 AC091304.6-201ENST00000619761 202 ntBASIC6.46□□□□□ -1.38
CD40P25942 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 FKBP1AP4-201ENST00000631775 336 ntBASIC6.46□□□□□ -1.38
CD40P25942 AC073488.7-201ENST00000633785 778 ntBASIC6.46□□□□□ -1.38
CD40P25942 FRG1EP-201ENST00000634469 770 ntBASIC6.46□□□□□ -1.38
CD40P25942 AP003399.1-201ENST00000637534 361 ntBASIC6.46□□□□□ -1.38
CD40P25942 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.46□□□□□ -1.38
CD40P25942 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CD40P25942 AC016582.1-202ENST00000636341 2982 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms