Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 RN7SL149P-201ENST00000465197 281 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 RPSAP39-201ENST00000467439 883 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AC020898.1-201ENST00000474167 787 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 SYT14P1-201ENST00000481459 721 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 SUMO1P1-201ENST00000497904 306 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 SCARNA20.1-201ENST00000516009 138 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC107952.1-201ENST00000524200 376 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC126177.6-201ENST00000550420 1009 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.55□□□□□ -1.04
ERCC3P19447 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC091932.1-201ENST00000569381 427 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.55□□□□□ -1.04
ERCC3P19447 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.55□□□□□ -1.04
ERCC3P19447 AL157392.4-201ENST00000609756 345 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 AC093875.1-201ENST00000623688 504 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 AL034417.4-202ENST00000642135 2236 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.55□□□□□ -1.04
ERCC3P19447 DDX10P2-201ENST00000417796 2614 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.55□□□□□ -1.04
ERCC3P19447 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.55□□□□□ -1.04
ERCC3P19447 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 AL359715.4-201ENST00000606629 1436 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 AP003119.3-201ENST00000566747 4192 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.54□□□□□ -1.04
ERCC3P19447 RNA5SP238-201ENST00000365464 120 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ERCC3P19447 RPL22P22-201ENST00000395439 379 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 AL391422.1-201ENST00000402155 436 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 HMGB3P19-201ENST00000403971 560 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 GTF2IP5-201ENST00000414608 731 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 OSTCP2-201ENST00000437956 444 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 MTND1P31-201ENST00000449206 961 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 TPT1P1-201ENST00000458495 518 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.54□□□□□ -1.04
ERCC3P19447 SUMO2P17-201ENST00000504438 285 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.54□□□□□ -1.04
ERCC3P19447 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.54□□□□□ -1.04
ERCC3P19447 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC8.54□□□□□ -1.04
ERCC3P19447 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 AC063952.1-203ENST00000634410 658 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 AC233280.20-201ENST00000637412 416 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 PCF11-AS1-201ENST00000602322 1516 ntBASIC8.54□□□□□ -1.04
ERCC3P19447 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.54□□□□□ -1.04
ERCC3P19447 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.54□□□□□ -1.04
ERCC3P19447 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ERCC3P19447 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ERCC3P19447 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.53□□□□□ -1.04
ERCC3P19447 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms