Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SCARNA18.2-201ENST00000516882 84 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC005070.2-201ENST00000604391 260 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC012640.3-201ENST00000607847 430 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC244517.3-201ENST00000616254 1235 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC073263.3-201ENST00000624449 858 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AL121936.2-201ENST00000641935 662 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 AC068769.1-201ENST00000474767 2426 ntBASIC8.1□□□□□ -1.11
UPF2Q9HAU5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
UPF2Q9HAU5 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AC034229.2-201ENST00000566945 2508 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 RNA5SP251-201ENST00000410614 137 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 RN7SKP296-201ENST00000411185 341 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 RPL23AP18-201ENST00000416139 468 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 SCDP1-201ENST00000455244 1081 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 DCAF13P2-201ENST00000514188 555 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 AC092032.1-201ENST00000603090 165 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 SNORA16A-202ENST00000628458 135 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 PWRN1-212ENST00000569908 1435 ntBASIC8.09□□□□□ -1.11
UPF2Q9HAU5 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
UPF2Q9HAU5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
UPF2Q9HAU5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 OR10D1P-201ENST00000355343 936 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 ST13P2-201ENST00000438916 1109 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC019080.2-201ENST00000453859 394 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 RN7SL518P-201ENST00000491887 280 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 NPM1P27-201ENST00000502784 830 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC026774.2-201ENST00000513990 1098 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 OR5AU1-204ENST00000641822 1197 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 AL731532.1-201ENST00000623972 4236 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.08□□□□□ -1.12
UPF2Q9HAU5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
UPF2Q9HAU5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AL157831.2-201ENST00000564681 3095 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms