Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC100810.3-201ENST00000633189 2240 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PSMC1P7-201ENST00000495689 1315 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC104446.1-201ENST00000613728 1321 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MAPK10-333ENST00000641607 2481 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC090983.1-201ENST00000623426 3897 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 RN7SKP278-201ENST00000410504 342 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 UBE2V1P9-201ENST00000414760 368 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 P2RY10P2-201ENST00000416730 913 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MTND6P1-201ENST00000417434 424 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC091492.1-201ENST00000419844 272 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 OR5M12P-201ENST00000423388 929 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 GAPDHP73-201ENST00000423411 1007 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 NEK4P1-201ENST00000433383 879 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 FABP5P3-201ENST00000437960 408 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL353572.1-201ENST00000442490 417 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC097263.1-201ENST00000496795 606 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 GOLGA5P1-201ENST00000507317 980 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 RNA5SP287-201ENST00000516358 103 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC079064.1-201ENST00000528365 362 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 EIF1P5-201ENST00000585002 234 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC002069.2-201ENST00000603580 883 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC080013.4-201ENST00000607624 649 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC093673.2-201ENST00000609674 331 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 FAM27E3-202ENST00000614611 340 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL356752.1-201ENST00000615844 593 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 BX005195.1-201ENST00000618097 1198 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PART1_3.1-201ENST00000619680 131 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL035661.1-201ENST00000620459 1144 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AL451054.1-201ENST00000621770 772 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC087893.2-201ENST00000623272 255 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AP003499.2-201ENST00000624100 483 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 AC036108.4-201ENST00000611654 2516 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MFSD8-227ENST00000641393 4069 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSBP3Q9BWW4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms