Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
COL4A5P29400 RN7SL717P-201ENST00000478343 297 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.76□□□□□ -1.17
COL4A5P29400 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 AC130360.2-201ENST00000533477 1556 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 RFPL4AP6-201ENST00000616792 846 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 OR4C1P-202ENST00000641065 1569 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.76□□□□□ -1.17
COL4A5P29400 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 PRELID1P2-201ENST00000407805 396 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 MIR1178-201ENST00000408396 91 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 CDK7P1-201ENST00000434574 693 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AC245452.2-201ENST00000435222 392 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 PCBP2P1-201ENST00000437262 977 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
COL4A5P29400 RN7SL193P-201ENST00000491708 276 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 MTND6P8-201ENST00000503471 522 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AC008638.1-201ENST00000506035 866 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 KHDC1P1-201ENST00000511053 508 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 AC108673.3-201ENST00000609183 335 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 AC131009.3-201ENST00000621809 287 ntBASIC7.76□□□□□ -1.17
COL4A5P29400 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.76□□□□□ -1.17
COL4A5P29400 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.76□□□□□ -1.17
COL4A5P29400 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 SACS-202ENST00000402364 15134 ntTSL 2 BASIC7.76□□□□□ -1.17
COL4A5P29400 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL4A5P29400 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 CASC19-238ENST00000641523 1558 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 AC023245.2-201ENST00000530760 2978 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 RNA5SP178-201ENST00000410380 128 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 GTF3AP1-201ENST00000416942 1004 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.75□□□□□ -1.17
COL4A5P29400 CYP4F32P-201ENST00000426492 504 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.75□□□□□ -1.17
COL4A5P29400 NDUFS5P5-201ENST00000437256 321 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 RN7SL515P-201ENST00000463999 297 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.75□□□□□ -1.17
COL4A5P29400 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.75□□□□□ -1.17
COL4A5P29400 AC124945.1-201ENST00000485133 188 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 RPL34P33-201ENST00000486062 334 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 RPL7L1P4-201ENST00000513004 707 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 CR383658.1-201ENST00000514609 734 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 AC122713.1-201ENST00000518368 1015 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.75□□□□□ -1.17
COL4A5P29400 AC007956.1-201ENST00000555623 542 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.75□□□□□ -1.17
COL4A5P29400 AC129778.1-202ENST00000623812 261 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 AL591379.1-207ENST00000635982 261 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
COL4A5P29400 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 AP005139.1-201ENST00000580702 1647 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
COL4A5P29400 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL4A5P29400 PSG10P-201ENST00000501199 1500 ntBASIC7.75□□□□□ -1.17
COL4A5P29400 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms