Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC8.42□□□□□ -1.06
VARSP26640 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
VARSP26640 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
VARSP26640 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARSP26640 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
VARSP26640 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 AC110998.1-201ENST00000519029 2053 ntBASIC8.41□□□□□ -1.06
VARSP26640 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 FBXW11P1-201ENST00000393804 1474 ntBASIC8.41□□□□□ -1.06
VARSP26640 AL390728.4-201ENST00000421406 1465 ntBASIC8.41□□□□□ -1.06
VARSP26640 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
VARSP26640 RNU6-560P-201ENST00000364007 108 ntBASIC8.41□□□□□ -1.06
VARSP26640 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 TAF9BP1-201ENST00000396646 746 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC003045.1-201ENST00000398779 713 ntBASIC8.41□□□□□ -1.06
VARSP26640 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.41□□□□□ -1.06
VARSP26640 RPS7P13-201ENST00000413955 498 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC244157.1-201ENST00000415642 163 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.41□□□□□ -1.06
VARSP26640 AL049734.1-201ENST00000422384 608 ntBASIC8.41□□□□□ -1.06
VARSP26640 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.41□□□□□ -1.06
VARSP26640 RPL36P2-201ENST00000426026 315 ntBASIC8.41□□□□□ -1.06
VARSP26640 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 AC005189.1-201ENST00000431286 310 ntBASIC8.41□□□□□ -1.06
VARSP26640 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 AC008072.1-201ENST00000434254 824 ntBASIC8.41□□□□□ -1.06
VARSP26640 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 NDUFA5P4-201ENST00000436704 385 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC092427.1-201ENST00000439177 601 ntBASIC8.41□□□□□ -1.06
VARSP26640 DPPA3P1-201ENST00000448050 469 ntBASIC8.41□□□□□ -1.06
VARSP26640 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 HAUS6P3-201ENST00000456660 1107 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC006534.1-201ENST00000469329 541 ntBASIC8.41□□□□□ -1.06
VARSP26640 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 RPS10P16-201ENST00000483812 496 ntBASIC8.41□□□□□ -1.06
VARSP26640 RPL4P1-201ENST00000496596 1278 ntBASIC8.41□□□□□ -1.06
VARSP26640 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 AC023632.1-201ENST00000518463 375 ntBASIC8.41□□□□□ -1.06
VARSP26640 IGLC5-201ENST00000519670 293 ntBASIC8.41□□□□□ -1.06
VARSP26640 IGLV3-7-201ENST00000522952 271 ntBASIC8.41□□□□□ -1.06
VARSP26640 HNRNPA1P38-201ENST00000523612 957 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.41□□□□□ -1.06
VARSP26640 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC8.41□□□□□ -1.06
VARSP26640 BANF2-205ENST00000545418 360 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.41□□□□□ -1.06
VARSP26640 AC027243.2-201ENST00000602530 724 ntBASIC8.41□□□□□ -1.06
VARSP26640 AP001267.4-201ENST00000602598 545 ntBASIC8.41□□□□□ -1.06
VARSP26640 LLPHP1-201ENST00000603571 367 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC002553.4-201ENST00000616896 331 ntBASIC8.41□□□□□ -1.06
VARSP26640 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.41□□□□□ -1.06
VARSP26640 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.41□□□□□ -1.06
VARSP26640 FAM157B-203ENST00000639350 358 ntBASIC8.41□□□□□ -1.06
VARSP26640 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
VARSP26640 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8.41□□□□□ -1.06
VARSP26640 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARSP26640 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARSP26640 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms