Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
ERCC3P19447 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ERCC3P19447 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.56□□□□□ -1.04
ERCC3P19447 OR52B5P-204ENST00000641744 3467 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 ZNF812P-201ENST00000457674 1694 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
ERCC3P19447 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 RNU1-122P-201ENST00000365538 156 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
ERCC3P19447 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
ERCC3P19447 RNU6-298P-201ENST00000390888 96 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AP002530.1-201ENST00000405705 684 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.56□□□□□ -1.04
ERCC3P19447 RN7SKP207-201ENST00000411204 303 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 AC092447.3-201ENST00000426027 686 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 BX119321.1-201ENST00000428912 797 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 MTCO1P43-201ENST00000431831 488 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8.56□□□□□ -1.04
ERCC3P19447 RPL29P7-201ENST00000440227 457 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 LIN28AP2-201ENST00000445283 458 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 CYCSP20-201ENST00000473154 315 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC079594.1-201ENST00000489757 331 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC093720.1-201ENST00000505681 714 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.56□□□□□ -1.04
ERCC3P19447 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.56□□□□□ -1.04
ERCC3P19447 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC8.56□□□□□ -1.04
ERCC3P19447 RNU6-276P-201ENST00000516114 96 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 EEF1A1P37-201ENST00000522748 715 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AP001646.2-201ENST00000528645 1156 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 OR6M3P-201ENST00000531567 700 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 PHBP2-201ENST00000532859 806 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 LRRC34P1-201ENST00000542742 915 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.56□□□□□ -1.04
ERCC3P19447 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.56□□□□□ -1.04
ERCC3P19447 DPPA3P2-201ENST00000553589 478 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 AL109628.1-201ENST00000556877 366 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.56□□□□□ -1.04
ERCC3P19447 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.56□□□□□ -1.04
ERCC3P19447 ARGFXP2-201ENST00000579304 949 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.56□□□□□ -1.04
ERCC3P19447 AL513548.2-201ENST00000602994 1207 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC098935.2-201ENST00000604222 466 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 AC093635.1-201ENST00000609028 555 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 OR8A1-204ENST00000642111 1145 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 AC090643.1-201ENST00000623600 3100 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
ERCC3P19447 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 SAMM50P1-201ENST00000455403 1399 ntBASIC8.56□□□□□ -1.04
ERCC3P19447 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ERCC3P19447 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ERCC3P19447 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
ERCC3P19447 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ERCC3P19447 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 RNU6-481P-201ENST00000384194 107 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 MIR498-201ENST00000385134 124 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 RPS3AP5-201ENST00000389400 821 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AL451061.1-201ENST00000407887 862 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 AC009413.1-201ENST00000414823 399 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC8.55□□□□□ -1.04
ERCC3P19447 ELOCP11-201ENST00000436690 332 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.55□□□□□ -1.04
ERCC3P19447 ELOCP16-201ENST00000444494 332 ntBASIC8.55□□□□□ -1.04
ERCC3P19447 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.55□□□□□ -1.04
ERCC3P19447 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 270.8 ms