Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNU6-481P-201ENST00000384194 107 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC090114.1-201ENST00000393266 448 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TAF9BP2-201ENST00000400856 499 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SKP166-201ENST00000410812 305 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC016769.2-201ENST00000414815 475 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL354751.2-201ENST00000415471 210 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 DEFB130D-201ENST00000426866 237 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC008850.1-201ENST00000427546 362 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 OR4F13P-201ENST00000428478 931 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC096632.2-201ENST00000438139 1239 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 SNRPGP9-201ENST00000456025 225 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC109454.1-201ENST00000471205 498 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RPL9P6-201ENST00000492764 598 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 MRPL57P6-201ENST00000506570 309 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC006499.4-201ENST00000510947 694 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC026782.1-201ENST00000512952 449 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 MTCO1P35-201ENST00000515270 228 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 OR8I1P-201ENST00000529291 931 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RBM22P1-201ENST00000578589 1214 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC138207.8-204ENST00000579588 527 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 SYPL1P2-201ENST00000582878 727 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AP001269.3-201ENST00000588718 329 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC083899.3-201ENST00000603413 594 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL137798.1-201ENST00000607700 339 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC104458.1-201ENST00000608243 463 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL442067.2-201ENST00000614033 363 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CASC19-274ENST00000642018 970 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 HERC2P8-202ENST00000564334 3705 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 OR7E122P-202ENST00000641144 6171 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 DDX11L16-201ENST00000507418 1306 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.02□□□□□ -1.12
CNTNAP3Q9BZ76 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CNTNAP3Q9BZ76 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CNTNAP3Q9BZ76 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 Y_RNA.263-201ENST00000364659 114 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 SNORD116.1-201ENST00000365628 92 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 RNU6-1042P-201ENST00000384204 107 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 MT-TL1-201ENST00000386347 75 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 RNA5SP18-201ENST00000390935 121 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 AC004986.1-201ENST00000414855 607 ntBASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.02□□□□□ -1.13
CNTNAP3Q9BZ76 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms