Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 OR5AU1-204ENST00000641822 1197 ntBASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 AL023806.3-201ENST00000638502 2704 ntBASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 AC130464.1-201ENST00000416201 1500 ntBASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 MAPK10-290ENST00000641237 2826 ntBASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSBP3Q9BWW4 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 Y_RNA.194-201ENST00000363985 102 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SNORA51.7-201ENST00000384171 134 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC009237.9-201ENST00000414800 347 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC092042.2-201ENST00000417304 331 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 RPL36P1-201ENST00000419720 225 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL606495.1-201ENST00000422100 813 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC093107.1-201ENST00000422772 609 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OSTCP5-201ENST00000425293 453 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OR5BE1P-201ENST00000425977 939 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 DLGAP5P1-201ENST00000430307 464 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC004692.1-201ENST00000455430 424 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 RN7SL233P-201ENST00000469988 277 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 RPS17P11-201ENST00000474297 293 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OR7E22P-201ENST00000478335 1035 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 SUMO2P17-201ENST00000504438 285 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 RPF2P2-201ENST00000504693 896 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 MRPS33P3-201ENST00000513456 322 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC021146.10-201ENST00000515628 706 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OR7E94P-202ENST00000601375 790 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AL513548.2-201ENST00000602994 1207 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC103724.4-201ENST00000605981 292 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC131159.1-201ENST00000621854 213 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC018558.4-201ENST00000622153 281 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC073530.2-201ENST00000623987 261 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 OR5BE1P-202ENST00000641168 1176 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 AC096745.2-201ENST00000627783 1914 ntBASIC6.34□□□□□ -1.39
SSBP3Q9BWW4 TCP1P3-201ENST00000414406 1498 ntBASIC6.34□□□□□ -1.4
SSBP3Q9BWW4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
SSBP3Q9BWW4 Z99129.4-201ENST00000624649 2435 ntBASIC6.34□□□□□ -1.4
SSBP3Q9BWW4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.34□□□□□ -1.4
SSBP3Q9BWW4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.33□□□□□ -1.4
SSBP3Q9BWW4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms