Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 TPTE2P2-201ENST00000403471 1466 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 MTCO1P4-201ENST00000520516 1409 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 OR10D1P-201ENST00000355343 936 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC091492.1-201ENST00000419844 272 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL034399.1-201ENST00000451535 380 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC010878.1-201ENST00000456500 1047 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC104629.2-201ENST00000468627 598 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 RN7SL267P-201ENST00000485107 261 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC112225.1-201ENST00000508230 297 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 RNA5SP96-201ENST00000516041 107 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 SCARNA11.1-201ENST00000516918 132 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC100832.2-201ENST00000582080 776 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC012065.3-201ENST00000602736 439 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL109659.3-201ENST00000624985 950 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 RPSAP68-201ENST00000625020 438 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AP003485.1-201ENST00000625093 753 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC129502.1-201ENST00000623261 1654 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC092646.2-201ENST00000431242 2095 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 AC120036.2-201ENST00000509729 1474 ntBASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDK5RAP1Q96SZ6 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 UGT2B25P-201ENST00000511504 1586 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AL592494.2-201ENST00000425455 1548 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RPL5P5-201ENST00000392009 893 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AL136100.1-201ENST00000407696 330 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 OR13Z1P-201ENST00000416141 834 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC002127.1-201ENST00000421305 225 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RPL5P34-201ENST00000426545 891 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RPL17P35-201ENST00000432217 549 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 MTND4P15-201ENST00000437913 1033 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 OR51P1P-201ENST00000447547 942 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 RPL5P9-201ENST00000448118 886 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AL096803.1-201ENST00000456921 1021 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC022730.1-201ENST00000473114 568 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AP003102.1-201ENST00000525638 661 ntBASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.29□□□□□ -1.24
CDK5RAP1Q96SZ6 CR383656.14-201ENST00000551951 406 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms