RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
C11orf40-201ENST00000307616 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
C11orf40-201ENST00000307616 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
C11orf40-201ENST00000307616 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
C11orf40-201ENST00000307616 FOXD1Q16676 465 aa23.72■■□□□ 1.39
C11orf40-201ENST00000307616 PLPPR3Q6T4P5 718 aa23.72■■□□□ 1.39
C11orf40-201ENST00000307616 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
C11orf40-201ENST00000307616 ADRA2BP18089 450 aa22.74■■□□□ 1.23
C11orf40-201ENST00000307616 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
C11orf40-201ENST00000307616 MSH5O43196 834 aa21.88■■□□□ 1.09
C11orf40-201ENST00000307616 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
C11orf40-201ENST00000307616 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
C11orf40-201ENST00000307616 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
C11orf40-201ENST00000307616 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
C11orf40-201ENST00000307616 KCNA4P22459 653 aa20.34■□□□□ 0.85
C11orf40-201ENST00000307616 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
C11orf40-201ENST00000307616 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
C11orf40-201ENST00000307616 POTEDQ86YR6 584 aa20.12■□□□□ 0.81
C11orf40-201ENST00000307616 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
C11orf40-201ENST00000307616 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
C11orf40-201ENST00000307616 HOXD11P31277 338 aaPredicted RBP19.89■□□□□ 0.77
C11orf40-201ENST00000307616 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
C11orf40-201ENST00000307616 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
C11orf40-201ENST00000307616 SLC4A1APQ9BWU0 796 aaKnown RBP19.33■□□□□ 0.68
C11orf40-201ENST00000307616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.63
C11orf40-201ENST00000307616 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
C11orf40-201ENST00000307616 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
C11orf40-201ENST00000307616 ZBTB22O15209 634 aa18.72■□□□□ 0.59
C11orf40-201ENST00000307616 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
C11orf40-201ENST00000307616 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
C11orf40-201ENST00000307616 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
C11orf40-201ENST00000307616 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
C11orf40-201ENST00000307616 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
C11orf40-201ENST00000307616 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
C11orf40-201ENST00000307616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
C11orf40-201ENST00000307616 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
C11orf40-201ENST00000307616 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
C11orf40-201ENST00000307616 SAMD1Q6SPF0 538 aaPredicted RBP18.29■□□□□ 0.52
C11orf40-201ENST00000307616 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
C11orf40-201ENST00000307616 APLP2Q06481 763 aa18.17■□□□□ 0.5
C11orf40-201ENST00000307616 CAPN15O75808 1086 aa18.12■□□□□ 0.49
C11orf40-201ENST00000307616 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
C11orf40-201ENST00000307616 ATXN8OSP0DMR3 200 aa18.04■□□□□ 0.48
C11orf40-201ENST00000307616 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
C11orf40-201ENST00000307616 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
C11orf40-201ENST00000307616 DSG3P32926 999 aa17.82■□□□□ 0.44
C11orf40-201ENST00000307616 ABCB7O75027 752 aa17.79■□□□□ 0.44
C11orf40-201ENST00000307616 POLA2Q14181 598 aa17.7■□□□□ 0.42
C11orf40-201ENST00000307616 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
C11orf40-201ENST00000307616 FBLN2P98095 1184 aa17.26■□□□□ 0.35
C11orf40-201ENST00000307616 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
C11orf40-201ENST00000307616 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
C11orf40-201ENST00000307616 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
C11orf40-201ENST00000307616 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
C11orf40-201ENST00000307616 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
C11orf40-201ENST00000307616 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
C11orf40-201ENST00000307616 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
C11orf40-201ENST00000307616 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
C11orf40-201ENST00000307616 FKBP8Q14318 412 aa16.76■□□□□ 0.27
C11orf40-201ENST00000307616 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
C11orf40-201ENST00000307616 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
C11orf40-201ENST00000307616 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
C11orf40-201ENST00000307616 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
C11orf40-201ENST00000307616 PROM2Q8N271 834 aa16.49■□□□□ 0.23
C11orf40-201ENST00000307616 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
C11orf40-201ENST00000307616 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
C11orf40-201ENST00000307616 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
C11orf40-201ENST00000307616 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
C11orf40-201ENST00000307616 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
C11orf40-201ENST00000307616 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
C11orf40-201ENST00000307616 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
C11orf40-201ENST00000307616 FXR2P51116 673 aaKnown RBP eCLIP16.11■□□□□ 0.17
C11orf40-201ENST00000307616 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
C11orf40-201ENST00000307616 CHADLQ6NUI6 762 aa16.01■□□□□ 0.15
C11orf40-201ENST00000307616 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
C11orf40-201ENST00000307616 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
C11orf40-201ENST00000307616 MIER1Q8N108 512 aa15.96■□□□□ 0.15
C11orf40-201ENST00000307616 VASPP50552 380 aaPredicted RBP15.95■□□□□ 0.14
C11orf40-201ENST00000307616 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
C11orf40-201ENST00000307616 POTEHQ6S545 545 aa15.91■□□□□ 0.14
C11orf40-201ENST00000307616 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
C11orf40-201ENST00000307616 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
C11orf40-201ENST00000307616 MNX1P50219 401 aaPredicted RBP15.79■□□□□ 0.12
C11orf40-201ENST00000307616 IFNLR1Q8IU57 520 aaPredicted RBP15.74■□□□□ 0.11
C11orf40-201ENST00000307616 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
C11orf40-201ENST00000307616 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
C11orf40-201ENST00000307616 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
C11orf40-201ENST00000307616 HAX1O00165 279 aa15.61■□□□□ 0.09
C11orf40-201ENST00000307616 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
C11orf40-201ENST00000307616 NUBP1P53384 320 aa15.55■□□□□ 0.08
C11orf40-201ENST00000307616 SPOCK2Q92563 424 aa15.55■□□□□ 0.08
C11orf40-201ENST00000307616 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
C11orf40-201ENST00000307616 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
C11orf40-201ENST00000307616 EVX2Q03828 476 aa15.49■□□□□ 0.07
C11orf40-201ENST00000307616 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
C11orf40-201ENST00000307616 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
C11orf40-201ENST00000307616 ZRANB1Q9UGI0 708 aa15.44■□□□□ 0.06
C11orf40-201ENST00000307616 FAM212AQ96EL1 285 aa15.42■□□□□ 0.06
C11orf40-201ENST00000307616 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
C11orf40-201ENST00000307616 CIZ1Q9ULV3 898 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 484.6 ms