Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 OR2A3P-202ENST00000641249 1776 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RNU1-24P-201ENST00000364285 165 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RNA5SP35-201ENST00000391257 129 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC114402.2-201ENST00000432760 643 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC027124.1-201ENST00000440852 466 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 GOT2P2-201ENST00000450663 1251 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL492P-201ENST00000460700 295 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL216P-201ENST00000471607 298 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL382P-201ENST00000482631 282 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL849P-201ENST00000485236 295 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC011352.2-201ENST00000514574 1016 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC110056.1-201ENST00000525759 911 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 WDR45BP1-201ENST00000583470 1029 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MIR5682-201ENST00000584864 76 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MIR4428-201ENST00000584884 73 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC004908.1-201ENST00000606572 541 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AL023583.1-201ENST00000607518 1143 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 AC119674.1-204ENST00000641348 1343 ntBASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP3Q96JB5 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 OR5T3-201ENST00000303059 1023 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP429-201ENST00000363688 109 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 PPIAP26-201ENST00000377951 522 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 MIR640-201ENST00000385086 96 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 RANP7-201ENST00000418085 644 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 RPS7P4-201ENST00000444127 582 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 NMNAT1P3-201ENST00000457517 888 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 PPP1R2P6-201ENST00000478565 588 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC113398.2-201ENST00000507630 558 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 RPL7L1P7-201ENST00000509986 724 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC069240.2-201ENST00000550242 609 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AL591767.3-201ENST00000554632 525 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC091932.1-201ENST00000569381 427 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 TMF1P1-201ENST00000576058 373 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms