Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 RPS3P2-201ENST00000421346 701 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC104109.1-201ENST00000498563 436 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC106785.4-201ENST00000569492 412 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC100767.2-201ENST00000604840 693 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC073389.3-201ENST00000609434 935 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC092266.1-201ENST00000610958 165 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 LINC02495-203ENST00000636704 242 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 LYARP1-201ENST00000436977 1501 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 OR7E25P-201ENST00000344844 931 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 SNORA17A-201ENST00000391185 133 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC239367.3-201ENST00000428996 814 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC009963.3-201ENST00000458090 486 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 RPL19P11-201ENST00000495944 589 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC106872.4-201ENST00000510050 523 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 SCARNA21.2-201ENST00000516600 166 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC016144.1-201ENST00000548175 1087 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC109309.2-201ENST00000612597 332 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 SNORA17.5-201ENST00000630429 132 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SNED1Q8TER0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SNED1Q8TER0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
SNED1Q8TER0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 LPAL2-203ENST00000454031 2498 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 OR52B5P-204ENST00000641744 3467 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNED1Q8TER0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AL096800.1-201ENST00000405326 893 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 RPL12P12-201ENST00000424633 501 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC112492.2-201ENST00000432774 1030 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC010240.2-201ENST00000445363 1205 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC108103.1-201ENST00000511286 446 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC027369.2-201ENST00000528030 440 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 NPIPB14P-203ENST00000532298 987 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC079905.1-201ENST00000549280 475 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AL591767.3-201ENST00000554632 525 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 AC073046.2-201ENST00000604756 527 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 MIR6768-201ENST00000610734 72 ntBASIC8.02□□□□□ -1.13
SNED1Q8TER0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
SNED1Q8TER0 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
SNED1Q8TER0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.01□□□□□ -1.13
SNED1Q8TER0 AC087392.3-202ENST00000358446 1754 ntBASIC8.01□□□□□ -1.13
SNED1Q8TER0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms